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    Fcf2 pre-rRNA processing protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 833073, updated on 18-Sep-2024

    Summary

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    Official Full Name
    Fcf2 pre-rRNA processing protein
    Primary source
    TAIR:AT5G30495
    Locus tag
    AT5G30495
    See related
    Araport:AT5G30495
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
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    Genomic context

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    Location:
    chromosome: 5
    Exon count:
    6
    Sequence:
    Chromosome: 5; NC_003076.8 (11379907..11381657)

    Chromosome 5 - NC_003076.8Genomic Context describing neighboring genes Neighboring gene pseudo Neighboring gene pseudo Neighboring gene pseudo Neighboring gene pseudo

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003076.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana. Tabata S, et al. Nature, 2000 Dec 14. PMID 11130714

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    NM_147961.4
    NM_180760.2

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    located_in nucleus ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    Fcf2 pre-rRNA processing protein
    NP_680266.2
    • Fcf2 pre-rRNA processing protein; CONTAINS InterPro DOMAIN/s: Fcf2 pre-rRNA processing (InterPro:IPR014810); BEST Arabidopsis thaliana protein match is: Fcf2 pre-rRNA processing protein (TAIR:AT1G54770.1); Has 334 Blast hits to 334 proteins in 173 species: Archae - 0; Bacteria - 0; Metazoa - 110; Fungi - 124; Plants - 58; Viruses - 0; Other Eukaryotes - 42 (source: NCBI BLink).
    NP_851091.1
    • Fcf2 pre-rRNA processing protein; CONTAINS InterPro DOMAIN/s: Fcf2 pre-rRNA processing (InterPro:IPR014810); BEST Arabidopsis thaliana protein match is: Fcf2 pre-rRNA processing protein (TAIR:AT1G54770.1); Has 334 Blast hits to 334 proteins in 173 species: Archae - 0; Bacteria - 0; Metazoa - 110; Fungi - 124; Plants - 58; Viruses - 0; Other Eukaryotes - 42 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003076.8 Reference assembly

      Range
      11379907..11381657
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_147961.4 → NP_680266.2  Fcf2 pre-rRNA processing protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_680266.2

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178UKZ6, F4KCY1
      Conserved Domains (1) summary
      pfam08698
      Location:71 → 165
      Fcf2; Fcf2 pre-rRNA processing

    2. NM_180760.2 → NP_851091.1  Fcf2 pre-rRNA processing protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_851091.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178UKZ6, F4KCY1
      Conserved Domains (1) summary
      pfam08698
      Location:71 → 165
      Fcf2; Fcf2 pre-rRNA processing
    Nucleotide Protein
    Heading Accession and Version

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