U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    ER lumen protein retaining receptor family protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 816655, updated on 18-Sep-2024

    Summary

    Go to the top of the page Help
    Official Full Name
    ER lumen protein retaining receptor family protein
    Primary source
    TAIR:AT2G21190
    Locus tag
    AT2G21190
    See related
    Araport:AT2G21190
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    F26H11.5; F26H11_5
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    Location:
    chromosome: 2
    Exon count:
    6
    Sequence:
    Chromosome: 2; NC_003071.7 (9080760..9083009)

    Chromosome 2 - NC_003071.7Genomic Context describing neighboring genes Neighboring gene ncRNA Neighboring gene miscRNA Neighboring gene uncharacterized protein Neighboring gene SAUR-like auxin-responsive protein family Neighboring gene SAUR-like auxin-responsive protein family

    Genomic regions, transcripts, and products

    Go to the top of the page Help
    Genomic Sequence:
    NC_003071.7

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. Sequence and analysis of chromosome 2 of the plant Arabidopsis thaliana. Lin X, et al. Nature, 1999 Dec 16. PMID 10617197

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help
    NM_127690.4

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables ER retention sequence binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    Process Evidence Code Pubs
    involved_in protein retention in ER lumen IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    is_active_in cellular_component ND
    No biological Data available
    more info
    		  

    General protein information

    Go to the top of the page Help
    Preferred Names
    ER lumen protein retaining receptor family protein
    NP_565501.1
    • ER lumen protein retaining receptor family protein; FUNCTIONS IN: ER retention sequence binding, receptor activity; INVOLVED IN: protein retention in ER lumen, protein transport; LOCATED IN: integral to membrane; EXPRESSED IN: male gametophyte, pollen tube; EXPRESSED DURING: M germinated pollen stage; CONTAINS InterPro DOMAIN/s: ER lumen protein retaining receptor (InterPro:IPR000133); BEST Arabidopsis thaliana protein match is: ER lumen protein retaining receptor family protein (TAIR:AT4G38790.1); Has 889 Blast hits to 889 proteins in 227 species: Archae - 0; Bacteria - 0; Metazoa - 314; Fungi - 178; Plants - 231; Viruses - 0; Other Eukaryotes - 166 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003071.7 Reference assembly

      Range
      9080760..9083009
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_127690.4 → NP_565501.1  ER lumen protein retaining receptor family protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_565501.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178VM43, A0A5S9X031, Q9C5H8, Q9SKP4
      Conserved Domains (1) summary
      pfam00810
      Location:69 → 212
      ER_lumen_recept; ER lumen protein retaining receptor
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

    Molecular Biology Databases
    Research Materials
    Tools