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    PCR2 PLANT CADMIUM RESISTANCE 2 [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 838052, updated on 18-Sep-2024

    Summary

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    Official Symbol
    PCR2
    Official Full Name
    PLANT CADMIUM RESISTANCE 2
    Primary source
    TAIR:AT1G14870
    Locus tag
    AT1G14870
    See related
    Araport:AT1G14870
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    AtPCR2; F10B6.27; F10B6_27; PLANT CADMIUM RESISTANCE 2
    Summary
    PCR2 encodes a membrane protein involved in zinc transport and detoxification.
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    Genomic context

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    See PCR2 in Genome Data Viewer
    Location:
    chromosome: 1
    Exon count:
    4
    Sequence:
    Chromosome: 1; NC_003070.9 (5128344..5129731, complement)

    Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene nucleoporin 155 Neighboring gene nudix hydrolase homolog 18 Neighboring gene ncRNA Neighboring gene PLANT CADMIUM RESISTANCE 1

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003070.9

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Arabidopsis PCR2 is a zinc exporter involved in both zinc extrusion and long-distance zinc transport. Song WY, et al. Plant Cell, 2010 Jul. PMID 20647347, Free PMC Article
    2. Enhanced tolerance to oxidative stress in transgenic Arabidopsis plants expressing proteins of unknown function. Luhua S, et al. Plant Physiol, 2008 Sep. PMID 18614705, Free PMC Article
    3. Mapping the Arabidopsis organelle proteome. Dunkley TP, et al. Proc Natl Acad Sci U S A, 2006 Apr 25. PMID 16618929, Free PMC Article
    4. Novel Aquaporin Regulatory Mechanisms Revealed by Interactomics. Bellati J, et al. Mol Cell Proteomics, 2016 Nov. PMID 27609422, Free PMC Article
    5. Putative glycosyltransferases and other plant Golgi apparatus proteins are revealed by LOPIT proteomics. Nikolovski N, et al. Plant Physiol, 2012 Oct. PMID 22923678, Free PMC Article

    See all (7) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    NM_001332138.1
    NM_101356.5

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Process Evidence Code Pubs
    acts_upstream_of_or_within response to oxidative stress IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytoplasm ISM
    Inferred from Sequence Model
    more info
    		  
    located_in plasma membrane HDA PubMed 
    located_in plasma membrane IDA
    Inferred from Direct Assay
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    PLANT CADMIUM RESISTANCE 2
    NP_172940.1
    • PLANT CADMIUM RESISTANCE 2 (PCR2); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to oxidative stress; LOCATED IN: plasma membrane; EXPRESSED IN: callus; CONTAINS InterPro DOMAIN/s: Protein of unknown function Cys-rich (InterPro:IPR006461); BEST Arabidopsis thaliana protein match is: PLAC8 family protein (TAIR:AT5G35525.1); Has 803 Blast hits to 802 proteins in 112 species: Archae - 0; Bacteria - 0; Metazoa - 123; Fungi - 115; Plants - 527; Viruses - 0; Other Eukaryotes - 38 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003070.9 Reference assembly

      Range
      5128344..5129731 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_101356.5 → NP_172940.1  PLANT CADMIUM RESISTANCE 2 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_172940.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q9LQU4
      UniProtKB/TrEMBL
      A0A178WDU8, A0A5S9UIM1, A0A654E9U5
      Conserved Domains (1) summary
      pfam04749
      Location:16 → 114
      PLAC8; PLAC8 family

    2. NM_001332138.1 → NP_001320690.1  PLANT CADMIUM RESISTANCE 2 [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A1P8ANK9, A0A654E9U5
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9LQU4.1

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