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    IGMT3 O-methyltransferase family protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 838707, updated on 18-Sep-2024

    Summary

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    Official Symbol
    IGMT3
    Official Full Name
    O-methyltransferase family protein
    Primary source
    TAIR:AT1G21110
    Locus tag
    AT1G21110
    See related
    Araport:AT1G21110
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    indole glucosinolate O-methyltransferase 3; T22I11.6; T22I11_6
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    Genomic context

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    See IGMT3 in Genome Data Viewer
    Location:
    chromosome: 1
    Exon count:
    3
    Sequence:
    Chromosome: 1; NC_003070.9 (7389981..7391603, complement)

    Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene Cupredoxin superfamily protein Neighboring gene O-methyltransferase family protein Neighboring gene O-methyltransferase family protein Neighboring gene O-methyltransferase family protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003070.9

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Genome-Wide Identification of Arabidopsis LBD29 Target Genes Reveals the Molecular Events behind Auxin-Induced Cell Reprogramming during Callus Formation. Xu C, et al. Plant Cell Physiol, 2018 Apr 1. PMID 29121271
    2. Plant O-methyltransferases: molecular analysis, common signature and classification. Ibrahim RK, et al. Plant Mol Biol, 1998 Jan. PMID 9484457
    3. Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Theologis A, et al. Nature, 2000 Dec 14. PMID 11130712

    GeneRIFs: Gene References Into Functions

    Pathways from PubChem

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    General gene information

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    NM_101965.3

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables O-methyltransferase activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables protein dimerization activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    Process Evidence Code Pubs
    acts_upstream_of_or_within callus formation IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytosol TAS
    Traceable Author Statement
    more info
    		 PubMed 
    located_in nucleus ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    O-methyltransferase family protein
    NP_173535.1
    • O-methyltransferase family protein; FUNCTIONS IN: methyltransferase activity, O-methyltransferase activity, protein dimerization activity; LOCATED IN: cytosol; CONTAINS InterPro DOMAIN/s: Winged helix-turn-helix transcription repressor DNA-binding (InterPro:IPR011991), Plant methyltransferase dimerisation (InterPro:IPR012967), O-methyltransferase, family 2 (InterPro:IPR001077), O-methyltransferase, COMT, eukaryota (InterPro:IPR016461); BEST Arabidopsis thaliana protein match is: O-methyltransferase family protein (TAIR:AT1G21120.1); Has 3289 Blast hits to 3284 proteins in 565 species: Archae - 1; Bacteria - 890; Metazoa - 104; Fungi - 640; Plants - 1549; Viruses - 0; Other Eukaryotes - 105 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003070.9 Reference assembly

      Range
      7389981..7391603 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_101965.3 → NP_173535.1  O-methyltransferase family protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_173535.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q9LPU6
      UniProtKB/TrEMBL
      A0A654ECK2
      Conserved Domains (2) summary
      pfam08100
      Location:40 → 95
      dimerization; dimerization domain
      cl17173
      Location:150 → 355
      AdoMet_MTases; S-adenosylmethionine-dependent methyltransferases (SAM or AdoMet-MTase), class I; AdoMet-MTases are enzymes that use S-adenosyl-L-methionine (SAM or AdoMet) as a substrate for methyltransfer, creating the product S-adenosyl-L-homocysteine (AdoHcy). ...
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9LPU6.1

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