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    Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 843447, updated on 18-Sep-2024

    Summary

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    Official Full Name
    Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein
    Primary source
    TAIR:AT1G71070
    Locus tag
    AT1G71070
    See related
    Araport:AT1G71070
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    F23N20.6; F23N20_6
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    Genomic context

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    Location:
    chromosome: 1
    Exon count:
    4
    Sequence:
    Chromosome: 1; NC_003070.9 (26807183..26809520, complement)

    Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene Heavy metal transport/detoxification superfamily protein Neighboring gene Tetratricopeptide repeat (TPR)-like superfamily protein Neighboring gene RNA polymerase II transcription elongation factor Neighboring gene Auxin efflux carrier family protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003070.9

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Isolation and proteomic characterization of the Arabidopsis Golgi defines functional and novel components involved in plant cell wall biosynthesis. Parsons HT, et al. Plant Physiol, 2012 May. PMID 22430844, Free PMC Article
    2. Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Theologis A, et al. Nature, 2000 Dec 14. PMID 11130712

    GeneRIFs: Gene References Into Functions

    General gene information

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    NM_105776.3

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables glucuronosyltransferase activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables glycosyltransferase activity ISS
    Inferred from Sequence or Structural Similarity
    more info
    		  
    Component Evidence Code Pubs
    located_in Golgi apparatus HDA PubMed 

    General protein information

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    Preferred Names
    Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein
    NP_565009.1
    • Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein; FUNCTIONS IN: transferase activity, transferring glycosyl groups, acetylglucosaminyltransferase activity; INVOLVED IN: carbohydrate biosynthetic process; LOCATED IN: endomembrane system, membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 14 (InterPro:IPR003406), Core-2/I-Branching enzyme (InterPro:IPR021141); BEST Arabidopsis thaliana protein match is: Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein (TAIR:AT5G39990.1); Has 951 Blast hits to 950 proteins in 117 species: Archae - 0; Bacteria - 44; Metazoa - 555; Fungi - 0; Plants - 318; Viruses - 14; Other Eukaryotes - 20 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003070.9 Reference assembly

      Range
      26807183..26809520 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_105776.3 → NP_565009.1  Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_565009.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178WMW3, Q9C9A1
      Conserved Domains (1) summary
      pfam02485
      Location:49 → 309
      Branch; Core-2/I-Branching enzyme
    Nucleotide Protein
    Heading Accession and Version

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