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    uncharacterized protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 827524, updated on 18-Sep-2024

    Summary

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    Official Full Name
    uncharacterized protein
    Primary source
    TAIR:AT4G17990
    Locus tag
    AT4G17990
    See related
    Araport:AT4G17990
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    T6K21.170; T6K21_170
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    Genomic context

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    Location:
    chromosome: 4
    Exon count:
    5
    Sequence:
    Chromosome: 4; NC_003075.7 (9984386..9985805, complement)

    Chromosome 4 - NC_003075.7Genomic Context describing neighboring genes Neighboring gene tRNA-Cys Neighboring gene NAC domain containing protein 71 Neighboring gene myo-inositol polyphosphate 5-phosphatase 2 Neighboring gene CheY-like two-component responsive regulator family protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003075.7

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Sequence and analysis of chromosome 4 of the plant Arabidopsis thaliana. Mayer K, et al. Nature, 1999 Dec 16. PMID 10617198

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    NM_001341250.1
    NM_117909.5

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    located_in nucleus ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    uncharacterized protein
    NP_193533.5
    • unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G17700.1); Has 134 Blast hits to 131 proteins in 2 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 134; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003075.7 Reference assembly

      Range
      9984386..9985805 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_117909.5 → NP_193533.5  uncharacterized protein AT4G17990 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_193533.5

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      O49698
      Conserved Domains (1) summary
      cl19902
      Location:9 → 125
      protein_MS5; Protein MS5

    2. NM_001341250.1 → NP_001328528.1  uncharacterized protein AT4G17990 [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      F4JQ18, O49698
      UniProtKB/TrEMBL
      A0A178V068, A0A5S9XVH8
      Conserved Domains (1) summary
      cl19902
      Location:9 → 225
      protein_MS5; Protein MS5
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    O49698.2

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