U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    AUG5 HAUS augmin-like complex subunit [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 833879, updated on 18-Sep-2024

    Summary

    Go to the top of the page Help
    Official Symbol
    AUG5
    Official Full Name
    HAUS augmin-like complex subunit
    Primary source
    TAIR:AT5G38880
    Locus tag
    AT5G38880
    See related
    Araport:AT5G38880
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    augmin subunit 5; K15E6.9; K15E6_9
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See AUG5 in Genome Data Viewer
    Location:
    chromosome: 5
    Exon count:
    10
    Sequence:
    Chromosome: 5; NC_003076.8 (15562939..15569250, complement)

    Chromosome 5 - NC_003076.8Genomic Context describing neighboring genes Neighboring gene BES1-interacting Myc-like protein 3 Neighboring gene pseudo Neighboring gene uncharacterized protein Neighboring gene Nucleic acid-binding, OB-fold-like protein Neighboring gene RING/U-box superfamily protein Neighboring gene Thioredoxin superfamily protein

    Genomic regions, transcripts, and products

    Go to the top of the page Help
    Genomic Sequence:
    NC_003076.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. Characterization of the Arabidopsis augmin complex uncovers its critical function in the assembly of the acentrosomal spindle and phragmoplast microtubule arrays. Hotta T, et al. Plant Cell, 2012 Apr. PMID 22505726, Free PMC Article
    2. Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana. Tabata S, et al. Nature, 2000 Dec 14. PMID 11130714

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help
    NM_123249.3

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables microtubule minus-end binding IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in spindle assembly IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    part_of HAUS complex IEA
    Inferred from Electronic Annotation
    more info
    		  
    located_in spindle microtubule IDA
    Inferred from Direct Assay
    more info
    		 PubMed 

    General protein information

    Go to the top of the page Help
    Preferred Names
    HAUS augmin-like complex subunit
    NP_198704.2
    • unknown protein; Has 474 Blast hits to 433 proteins in 138 species: Archae - 6; Bacteria - 80; Metazoa - 195; Fungi - 44; Plants - 59; Viruses - 0; Other Eukaryotes - 90 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003076.8 Reference assembly

      Range
      15562939..15569250 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_123249.3 → NP_198704.2  HAUS augmin-like complex subunit [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_198704.2

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q570F2, Q7XYR0, Q9FMB4
      UniProtKB/TrEMBL
      A0A178U914, A0A5S9Y9P8
      Conserved Domains (1) summary
      pfam14817
      Location:11 → 780
      HAUS5; HAUS augmin-like complex subunit 5
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9FMB4.1

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

    Molecular Biology Databases
    Research Materials
    Tools