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    UGP2 UDP-glucose pyrophosphorylase 2 [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 831596, updated on 14-Nov-2024

    Summary

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    Official Symbol
    UGP2
    Official Full Name
    UDP-glucose pyrophosphorylase 2
    Primary source
    TAIR:AT5G17310
    Locus tag
    AT5G17310
    See related
    Araport:AT5G17310
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    AtUGP2; MKP11.26; MKP11_26; UDP-glucose pyrophosphorylase 2; UDP-GLUCOSE PYROPHOSPHORYLASE 2
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    Genomic context

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    See UGP2 in Genome Data Viewer
    Location:
    chromosome: 5
    Exon count:
    19
    Sequence:
    Chromosome: 5; NC_003076.8 (5696478..5700993, complement)

    Chromosome 5 - NC_003076.8Genomic Context describing neighboring genes Neighboring gene oxidoreductase-like protein, amino-terminal protein Neighboring gene autophagy protein Apg5 family Neighboring gene Homeodomain-like superfamily protein Neighboring gene uncharacterized protein Neighboring gene homeodomain GLABROUS 9 Neighboring gene glutamate decarboxylase

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003076.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. UDP-glucose pyrophosphorylase is rate limiting in vegetative and reproductive phases in Arabidopsis thaliana. Park JI, et al. Plant Cell Physiol, 2010 Jun. PMID 20435647
    2. UDP-glucose pyrophosphorylase is not rate limiting, but is essential in Arabidopsis. Meng M, et al. Plant Cell Physiol, 2009 May. PMID 19366709
    3. A high content in lipid-modified peripheral proteins and integral receptor kinases features in the arabidopsis plasma membrane proteome. Marmagne A, et al. Mol Cell Proteomics, 2007 Nov. PMID 17644812
    4. A proteomic strategy for global analysis of plant protein complexes. Aryal UK, et al. Plant Cell, 2014 Oct. PMID 25293756, Free PMC Article
    5. A Pan-plant Protein Complex Map Reveals Deep Conservation and Novel Assemblies. McWhite CD, et al. Cell, 2020 Apr 16. PMID 32191846, Free PMC Article

    See all (7) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Pathways from PubChem

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    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    NM_001343490.1
    NM_001343491.1
    NM_001343492.1
    NM_001343493.1
    NM_121737.4
    NM_180506.2

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables UTP:glucose-1-phosphate uridylyltransferase activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    Process Evidence Code Pubs
    involved_in UDP-alpha-D-glucose metabolic process IEA
    Inferred from Electronic Annotation
    more info
    		  
    acts_upstream_of_or_within callose deposition in cell wall IGI
    Inferred from Genetic Interaction
    more info
    		 PubMed 
    acts_upstream_of_or_within pollen development IGI
    Inferred from Genetic Interaction
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytoplasm ISM
    Inferred from Sequence Model
    more info
    		  
    located_in cytosol HDA PubMed 
    located_in plasma membrane HDA PubMed 
    located_in plastid HDA PubMed 

    General protein information

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    Preferred Names
    UDP-glucose pyrophosphorylase 2
    NP_197233.1
    • UDP-glucose pyrophosphorylase 2 (UGP2); FUNCTIONS IN: UTP:glucose-1-phosphate uridylyltransferase activity, nucleotidyltransferase activity; INVOLVED IN: response to cadmium ion, callose deposition in cell wall, response to salt stress, metabolic process, pollen development; LOCATED IN: plasma membrane; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 17 growth stages; CONTAINS InterPro DOMAIN/s: UTP--glucose-1-phosphate uridylyltransferase, subgroup (InterPro:IPR016267), UTP--glucose-1-phosphate uridylyltransferase (InterPro:IPR002618); BEST Arabidopsis thaliana protein match is: UDP-GLUCOSE PYROPHOSPHORYLASE 1 (TAIR:AT3G03250.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
    NP_850837.1
    • UDP-glucose pyrophosphorylase 2 (UGP2); FUNCTIONS IN: UTP:glucose-1-phosphate uridylyltransferase activity, nucleotidyltransferase activity; INVOLVED IN: response to cadmium ion, callose deposition in cell wall, response to salt stress, metabolic process, pollen development; LOCATED IN: plasma membrane; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 17 growth stages; CONTAINS InterPro DOMAIN/s: UTP--glucose-1-phosphate uridylyltransferase (InterPro:IPR002618), Hantavirus nucleocapsid protein (InterPro:IPR002214); BEST Arabidopsis thaliana protein match is: UDP-GLUCOSE PYROPHOSPHORYLASE 1 (TAIR:AT3G03250.1); Has 1116 Blast hits to 1112 proteins in 411 species: Archae - 0; Bacteria - 382; Metazoa - 242; Fungi - 229; Plants - 150; Viruses - 0; Other Eukaryotes - 113 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003076.8 Reference assembly

      Range
      5696478..5700993 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_121737.4 → NP_197233.1  UDP-glucose pyrophosphorylase 2 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_197233.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      P57751, Q3E9G5
      UniProtKB/TrEMBL
      A0A178UCA6, A0A5S9Y772, A0A654G1T1
      Conserved Domains (1) summary
      PLN02474
      Location:2 → 470
      PLN02474; UTP--glucose-1-phosphate uridylyltransferase

    2. NM_001343492.1 → NP_001330921.1  UDP-glucose pyrophosphorylase 2 [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      F4KGY8

    3. NM_001343491.1 → NP_001330920.1  UDP-glucose pyrophosphorylase 2 [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A1P8BC93
      Conserved Domains (1) summary
      cl11394
      Location:1 → 336
      Glyco_tranf_GTA_type; Glycosyltransferase family A (GT-A) includes diverse families of glycosyl transferases with a common GT-A type structural fold

    4. NM_001343490.1 → NP_001330919.1  UDP-glucose pyrophosphorylase 2 [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A1P8BC98

    5. NM_001343493.1 → NP_001330922.1  UDP-glucose pyrophosphorylase 2 [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A1P8BC93
      Conserved Domains (1) summary
      cl11394
      Location:1 → 336
      Glyco_tranf_GTA_type; Glycosyltransferase family A (GT-A) includes diverse families of glycosyl transferases with a common GT-A type structural fold

    6. NM_180506.2 → NP_850837.1  UDP-glucose pyrophosphorylase 2 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_850837.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      F4KGY8
      Conserved Domains (1) summary
      cl11394
      Location:20 → 390
      Glyco_tranf_GTA_type; Glycosyltransferase family A (GT-A) includes diverse families of glycosyl transferases with a common GT-A type structural fold
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    P57751.1

    Gene LinkOut

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