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These reference sequences exist independently of genome builds. Explain
These reference sequences are curated independently of the genome
annotation cycle, so their versions may not match the RefSeq versions in the current
genome build. Identify version mismatches by comparing the version of the RefSeq in
this section to the one reported in Genomic regions,
transcripts, and products above.
mRNA and Protein(s)
-
NM_001361531.1 → NP_001348460.1 V-type proton ATPase 16 kDa proteolipid subunit c isoform a
Status: VALIDATED
- Description
- Transcript Variant: This variant (1) encodes the longest isoform (a).
- Source sequence(s)
-
BP769833, BY140472, CT010502
- Conserved Domains (2) summary
-
- TIGR01100
Location:72 → 177
- V_ATP_synt_C; vacuolar ATP synthase 16 kDa proteolipid subunit
- pfam00137
Location:152 → 211
- ATP-synt_C; ATP synthase subunit C
-
NM_001361532.1 → NP_001348461.1 V-type proton ATPase 16 kDa proteolipid subunit c isoform b
Status: VALIDATED
- Description
- Transcript Variant: This variant (2) differs in the 5' UTR and coding sequence compared to variant 1. The resulting isoform (b) is shorter at the N-terminus compared to isoform a. Variants 2 and 3 both encode the same isoform (b).
- Source sequence(s)
-
CT010502
- Consensus CDS
-
CCDS28476.1
- UniProtKB/Swiss-Prot
- P63082, Q3TD69
- UniProtKB/TrEMBL
- A3KML5, Q3UK60, Q4KL27, Q5XK06, Q8C1D9
- Related
- ENSMUSP00000111059.2, ENSMUST00000098862.9
- Conserved Domains (2) summary
-
- TIGR01100
Location:13 → 118
- V_ATP_synt_C; vacuolar ATP synthase 16 kDa proteolipid subunit
- cd18176
Location:86 → 153
- ATP-synt_Vo_c_ATP6C_rpt2; V-type proton ATPase 16 kDa proteolipid subunit (ATP6C/ATP6V0C/ATP6L/ATPL) and similar proteins
-
NM_001361533.1 → NP_001348462.1 V-type proton ATPase 16 kDa proteolipid subunit c isoform c
Status: VALIDATED
- Description
- Transcript Variant: This variant (4) differs in the 5' UTR and coding sequence compared to variant 1. The resulting isoform (c) is shorter at the N-terminus compared to isoform a. Variants 4-6 all encode the same isoform (c).
- Source sequence(s)
-
BY140472, CT010502
- UniProtKB/TrEMBL
-
Q3UK60
- Conserved Domains (2) summary
-
- cd18176
Location:59 → 126
- ATP-synt_Vo_c_ATP6C_rpt2; V-type proton ATPase 16 kDa proteolipid subunit (ATP6C/ATP6V0C/ATP6L/ATPL) and similar proteins
- cl00466
Location:1 → 91
- ATP-synt_C; ATP synthase subunit C
-
NM_001361534.1 → NP_001348463.1 V-type proton ATPase 16 kDa proteolipid subunit c isoform c
Status: VALIDATED
- Description
- Transcript Variant: This variant (5) differs in the 5' UTR and coding sequence compared to variant 1. The resulting isoform (c) is shorter at the N-terminus compared to isoform a. Variants 4-6 all encode the same isoform (c).
- Source sequence(s)
-
CT010502
- UniProtKB/TrEMBL
-
Q3UK60
- Conserved Domains (2) summary
-
- cd18176
Location:59 → 126
- ATP-synt_Vo_c_ATP6C_rpt2; V-type proton ATPase 16 kDa proteolipid subunit (ATP6C/ATP6V0C/ATP6L/ATPL) and similar proteins
- cl00466
Location:1 → 91
- ATP-synt_C; ATP synthase subunit C
-
NM_001361535.1 → NP_001348464.1 V-type proton ATPase 16 kDa proteolipid subunit c isoform c
Status: VALIDATED
- Description
- Transcript Variant: This variant (6) differs in the 5' UTR and coding sequence compared to variant 1. The resulting isoform (c) is shorter at the N-terminus compared to isoform a. Variants 4-6 all encode the same isoform (c).
- Source sequence(s)
-
BB873227, CT010502
- UniProtKB/TrEMBL
-
Q3UK60
- Conserved Domains (2) summary
-
- cd18176
Location:59 → 126
- ATP-synt_Vo_c_ATP6C_rpt2; V-type proton ATPase 16 kDa proteolipid subunit (ATP6C/ATP6V0C/ATP6L/ATPL) and similar proteins
- cl00466
Location:1 → 91
- ATP-synt_C; ATP synthase subunit C
-
NM_009729.4 → NP_033859.1 V-type proton ATPase 16 kDa proteolipid subunit c isoform b
See identical proteins and their annotated locations for NP_033859.1
Status: VALIDATED
- Description
- Transcript Variant: This variant (3) differs in the 5' UTR and coding sequence compared to variant 1. The resulting isoform (b) is shorter at the N-terminus compared to isoform a. Variants 2 and 3 both encode the same isoform (b).
- Source sequence(s)
-
AK002570, BC050939, BY245103
- Consensus CDS
-
CCDS28476.1
- UniProtKB/Swiss-Prot
- P63082, Q3TD69
- UniProtKB/TrEMBL
- A3KML5, Q3UK60, Q4KL27, Q5XK06, Q8C1D9
- Related
- ENSMUSP00000024932.6, ENSMUST00000024932.12
- Conserved Domains (2) summary
-
- TIGR01100
Location:13 → 118
- V_ATP_synt_C; vacuolar ATP synthase 16 kDa proteolipid subunit
- cd18176
Location:86 → 153
- ATP-synt_Vo_c_ATP6C_rpt2; V-type proton ATPase 16 kDa proteolipid subunit (ATP6C/ATP6V0C/ATP6L/ATPL) and similar proteins
The following sections contain reference sequences that belong to a
specific genome build. Explain
This section includes genomic Reference
Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as
RefSeqs for chromosomes and scaffolds (contigs) from both reference and alternate
assemblies. Model RNAs and proteins are also reported here.
Reference GRCm39 C57BL/6J
Genomic
-
NC_000083.7 Reference GRCm39 C57BL/6J
- Range
-
24382839..24388652 complement
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)