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    elongation factor G, putative (DUF668) [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 839956, updated on 18-Sep-2024

    Summary

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    Official Full Name
    elongation factor G, putative (DUF668)
    Primary source
    TAIR:AT1G30755
    Locus tag
    AT1G30755
    See related
    Araport:AT1G30755
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    PSI2; PSK SIMULATOR 2
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    Genomic context

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    Location:
    chromosome: 1
    Exon count:
    13
    Sequence:
    Chromosome: 1; NC_003070.9 (10905731..10909760, complement)

    Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene FAD-binding Berberine family protein Neighboring gene TPRXL Neighboring gene uncharacterized protein Neighboring gene FAD-binding Berberine family protein Neighboring gene ncRNA

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003070.9

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. The PSI family of nuclear proteins is required for growth in arabidopsis. Stührwohldt N, et al. Plant Mol Biol, 2014 Oct. PMID 25062973
    2. Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Theologis A, et al. Nature, 2000 Dec 14. PMID 11130712

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?
    1. PSI2 protein has a role in Arabidopsis growth.
      Title: The PSI family of nuclear proteins is required for growth in arabidopsis.
    Submit: New GeneRIF Correction

    General gene information

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    Homology

    NM_001332922.1
    NM_001332923.1
    NM_001332924.1
    NM_001332926.1
    NM_102812.3

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Process Evidence Code Pubs
    involved_in positive regulation of growth IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    located_in nucleus ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    elongation factor G, putative (DUF668)
    NP_564362.1
    • Protein of unknown function (DUF668); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF668 (InterPro:IPR007700), Protein of unknown function DUF3475 (InterPro:IPR021864); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF668) (TAIR:AT1G34320.1); Has 465 Blast hits to 399 proteins in 71 species: Archae - 2; Bacteria - 14; Metazoa - 66; Fungi - 16; Plants - 336; Viruses - 0; Other Eukaryotes - 31 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003070.9 Reference assembly

      Range
      10905731..10909760 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001332925.1 → NP_001320551.1  elongation factor G, putative (DUF668) [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q8L5Y3, Q9SA91
      UniProtKB/TrEMBL
      A0A178WN85, A0A654EJE8
      Conserved Domains (2) summary
      pfam05003
      Location:354 → 438
      DUF668; Protein of unknown function (DUF668)
      pfam11961
      Location:136 → 192
      DUF3475; Domain of unknown function (DUF3475)

    2. NM_102812.3 → NP_564362.1  elongation factor G, putative (DUF668) [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_564362.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q8L5Y3, Q9SA91
      UniProtKB/TrEMBL
      A0A178WN85, A0A654EJE8
      Conserved Domains (2) summary
      pfam05003
      Location:354 → 438
      DUF668; Protein of unknown function (DUF668)
      pfam11961
      Location:136 → 192
      DUF3475; Domain of unknown function (DUF3475)

    3. NM_001332923.1 → NP_001320553.1  elongation factor G, putative (DUF668) [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178WLF6, A0A1P8AN72

    4. NM_001332924.1 → NP_001320550.1  elongation factor G, putative (DUF668) [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178WLF6, A0A1P8AN59

    5. NM_001332922.1 → NP_001320552.1  elongation factor G, putative (DUF668) [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178WLF6, A0A1P8AN59

    6. NM_001332926.1 → NP_001320549.1  elongation factor G, putative (DUF668) [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q8L5Y3, Q9SA91
      UniProtKB/TrEMBL
      A0A178WN85, A0A654EJE8
      Conserved Domains (2) summary
      pfam05003
      Location:354 → 438
      DUF668; Protein of unknown function (DUF668)
      pfam11961
      Location:136 → 192
      DUF3475; Domain of unknown function (DUF3475)
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9SA91.2

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