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    transcription initiation factor TFIID subunit (Protein of unknown function, DUF584) [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 836189, updated on 18-Sep-2024

    Summary

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    Official Full Name
    transcription initiation factor TFIID subunit (Protein of unknown function, DUF584)
    Primary source
    TAIR:AT5G60680
    Locus tag
    AT5G60680
    See related
    Araport:AT5G60680
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    MUP24.10; MUP24_10
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    Genomic context

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    Location:
    chromosome: 5
    Exon count:
    1
    Sequence:
    Chromosome: 5; NC_003076.8 (24386010..24387304)

    Chromosome 5 - NC_003076.8Genomic Context describing neighboring genes Neighboring gene ncRNA Neighboring gene Ribosomal protein L11 family protein Neighboring gene Homeobox-leucine zipper family protein / lipid-binding START domain-containing protein Neighboring gene glycosyltransferase family protein 2 Neighboring gene Zinc finger (C3HC4-type RING finger) family protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003076.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana. Tabata S, et al. Nature, 2000 Dec 14. PMID 11130714

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    NM_125461.3

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    located_in nucleus ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    transcription initiation factor TFIID subunit (Protein of unknown function, DUF584)
    NP_200876.1
    • Protein of unknown function, DUF584; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF584 (InterPro:IPR007608); BEST Arabidopsis thaliana protein match is: Protein of unknown function, DUF584 (TAIR:AT3G45210.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003076.8 Reference assembly

      Range
      24386010..24387304
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_125461.3 → NP_200876.1  transcription initiation factor TFIID subunit (Protein of unknown function, DUF584) [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_200876.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178URJ1, Q8LE29, Q9FF51
      Conserved Domains (1) summary
      pfam04520
      Location:51 → 163
      Senescence_reg; Senescence regulator
    Nucleotide Protein
    Heading Accession and Version

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