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    ARIA ARM repeat protein interacting with ABF2 [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 832053, updated on 18-Sep-2024

    Summary

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    Official Symbol
    ARIA
    Official Full Name
    ARM repeat protein interacting with ABF2
    Primary source
    TAIR:AT5G19330
    Locus tag
    AT5G19330
    See related
    Araport:AT5G19330
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    ARM repeat protein interacting with ABF2; ARM repeat protein interacting with ABF2; F7K24.80; F7K24_80
    Summary
    Encodes an armadillo repeat protein involved in the abscisic acid response. The protein interacts with a transcription factor, ABF2, which controls ABA-dependent gene expression via the G-box-type ABA-responsive elements.
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    Genomic context

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    See ARIA in Genome Data Viewer
    Location:
    chromosome: 5
    Exon count:
    19
    Sequence:
    Chromosome: 5; NC_003076.8 (6507576..6512801, complement)

    Chromosome 5 - NC_003076.8Genomic Context describing neighboring genes Neighboring gene homeotic protein regulator Neighboring gene Defensin-like (DEFL) family protein Neighboring gene RAN GTPase activating protein 2 Neighboring gene uncharacterized protein Neighboring gene ncRNA

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003076.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. AtNEK6 interacts with ARIA and is involved in ABA response during seed germination. Lee SJ, et al. Mol Cells, 2010 Jun. PMID 20496121
    2. An ARIA-interacting AP2 domain protein is a novel component of ABA signaling. Lee SJ, et al. Mol Cells, 2009 Apr 30. PMID 19390821
    3. ARIA, an Arabidopsis arm repeat protein interacting with a transcriptional regulator of abscisic acid-responsive gene expression, is a novel abscisic acid signaling component. Kim S, et al. Plant Physiol, 2004 Nov. PMID 15516505, Free PMC Article
    4. AIP1 is a novel Agenet/Tudor domain protein from Arabidopsis that interacts with regulators of DNA replication, transcription and chromatin remodeling. Brasil JN, et al. BMC Plant Biol, 2015 Nov 4. PMID 26538092, Free PMC Article
    5. CrY2H-seq: a massively multiplexed assay for deep-coverage interactome mapping. Wanamaker SA, et al. Nat Methods, 2017 Aug. PMID 28650476, Free PMC Article

    See all (6) citations in PubMed

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?
    1. ARIA (arm repeat protein interacting with ABF2) is a positive regulator of abscisic acid response. [ARIA]
      Title: ARIA, an Arabidopsis arm repeat protein interacting with a transcriptional regulator of abscisic acid-responsive gene expression, is a novel abscisic acid signaling component.
    Submit: New GeneRIF Correction

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    NM_121938.3
    NM_180521.3

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables protein binding IPI
    Inferred from Physical Interaction
    more info
    		 PubMed 
    Process Evidence Code Pubs
    acts_upstream_of_or_within negative regulation of seed germination IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    involved_in protein ubiquitination IEA
    Inferred from Electronic Annotation
    more info
    		  
    acts_upstream_of_or_within response to abscisic acid IEP
    Inferred from Expression Pattern
    more info
    		 PubMed 
    acts_upstream_of_or_within response to abscisic acid IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    acts_upstream_of_or_within response to salt stress IEP
    Inferred from Expression Pattern
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytoplasm ISM
    Inferred from Sequence Model
    more info
    		  
    located_in nucleus IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    located_in nucleus ISM
    Inferred from Sequence Model
    more info
    		  
    located_in plasma membrane IDA
    Inferred from Direct Assay
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    ARM repeat protein interacting with ABF2
    NP_197434.1
    • ARM repeat protein interacting with ABF2 (ARIA); FUNCTIONS IN: protein binding; INVOLVED IN: response to salt stress, negative regulation of seed germination, response to abscisic acid stimulus; LOCATED IN: nucleus, plasma membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: BTB/POZ (InterPro:IPR013069), Armadillo-like helical (InterPro:IPR011989), BTB/POZ fold (InterPro:IPR011333), Armadillo (InterPro:IPR000225), BTB/POZ-like (InterPro:IPR000210), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: ARMADILLO BTB protein 1 (TAIR:AT5G13060.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
    NP_850852.1
    • ARM repeat protein interacting with ABF2 (ARIA); FUNCTIONS IN: protein binding; INVOLVED IN: response to salt stress, negative regulation of seed germination, response to abscisic acid stimulus; LOCATED IN: nucleus, plasma membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: BTB/POZ (InterPro:IPR013069), Armadillo-like helical (InterPro:IPR011989), BTB/POZ fold (InterPro:IPR011333), Armadillo (InterPro:IPR000225), BTB/POZ-like (InterPro:IPR000210), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: ARMADILLO BTB protein 1 (TAIR:AT5G13060.1); Has 17070 Blast hits to 12388 proteins in 371 species: Archae - 10; Bacteria - 73; Metazoa - 10231; Fungi - 1020; Plants - 4279; Viruses - 94; Other Eukaryotes - 1363 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003076.8 Reference assembly

      Range
      6507576..6512801 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_180521.3 → NP_850852.1  ARM repeat protein interacting with ABF2 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_850852.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      B9DHT4, Q56ZQ9
      UniProtKB/TrEMBL
      A0A178U9Q9, A0A178UCM4, A0A5S9Y5X6
      Conserved Domains (5) summary
      PLN03200
      Location:121 → 353
      PLN03200; cellulose synthase-interactive protein; Provisional
      COG1413
      Location:283 → 469
      HEAT; HEAT repeat [General function prediction only]
      sd00043
      Location:194 → 225
      ARM; armadillo repeat [structural motif]
      cd18352
      Location:528 → 643
      BTB_POZ_ARIA_plant; BTB (Broad-Complex, Tramtrack and Bric a brac) /POZ (poxvirus and zinc finger) domain found in plant ARM repeat protein interacting with ABF2 (ARIA) and similar proteins
      cd18504
      Location:637 → 700
      BACK_ARIA_like; BACK (BTB and C-terminal Kelch) domain found in plant ARM repeat protein interacting with ABF2 (ARIA) and similar proteins

    2. NM_121938.3 → NP_197434.1  ARM repeat protein interacting with ABF2 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_197434.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A654G2L1, F4K132
      Conserved Domains (4) summary
      smart00225
      Location:509 → 590
      BTB; Broad-Complex, Tramtrack and Bric a brac
      cd00020
      Location:195 → 312
      ARM; Armadillo/beta-catenin-like repeats. An approximately 40 amino acid long tandemly repeated sequence motif first identified in the Drosophila segment polarity gene armadillo; these repeats were also found in the mammalian armadillo homolog beta-catenin, ...
      pfam00651
      Location:497 → 584
      BTB; BTB/POZ domain
      sd00043
      Location:195 → 226
      ARM; armadillo repeat [structural motif]
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    B9DHT4.2

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