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    WRKY11 WRKY DNA-binding protein 11 [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 829282, updated on 18-Sep-2024

    Summary

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    Official Symbol
    WRKY11
    Official Full Name
    WRKY DNA-binding protein 11
    Primary source
    TAIR:AT4G31550
    Locus tag
    AT4G31550
    See related
    Araport:AT4G31550
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    ATWRKY11; F3L17.120; F3L17_120; WRKY DNA-binding protein 11
    Summary
    member of WRKY Transcription Factor; Group II-d; negative regulator of basal resistance to Pseudomonas syringae.
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    Genomic context

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    See WRKY11 in Genome Data Viewer
    Location:
    chromosome: 4
    Exon count:
    2
    Sequence:
    Chromosome: 4; NC_003075.7 (15289788..15291934, complement)

    Chromosome 4 - NC_003075.7Genomic Context describing neighboring genes Neighboring gene NAD(P)-binding Rossmann-fold superfamily protein Neighboring gene exocyst subunit exo70 family protein G1 Neighboring gene ncRNA Neighboring gene high chlorophyll fluorescence 153 Neighboring gene nucleoporin

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003075.7

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Solution structure of the DNA binding domain of Arabidopsis transcription factor WRKY11. Wang J, et al. Biochem Biophys Res Commun, 2023 Apr 23. PMID 36868077
    2. Studies on DNA-binding selectivity of WRKY transcription factors lend structural clues into WRKY-domain function. Ciolkowski I, et al. Plant Mol Biol, 2008 Sep. PMID 18523729, Free PMC Article
    3. Transcription factors WRKY11 and WRKY17 are involved in abiotic stress responses in Arabidopsis. Ali MA, et al. J Plant Physiol, 2018 Jul. PMID 29689430
    4. Transcription factors WRKY70 and WRKY11 served as regulators in rhizobacterium Bacillus cereus AR156-induced systemic resistance to Pseudomonas syringae pv. tomato DC3000 in Arabidopsis. Jiang CH, et al. J Exp Bot, 2016 Jan. PMID 26433201
    5. The transcription factors WRKY11 and WRKY17 act as negative regulators of basal resistance in Arabidopsis thaliana. Journot-Catalino N, et al. Plant Cell, 2006 Nov. PMID 17114354, Free PMC Article

    See all (16) citations in PubMed

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?
    1. Solution structure of the DNA binding domain of Arabidopsis transcription factor WRKY11.
      Title: Solution structure of the DNA binding domain of Arabidopsis transcription factor WRKY11.
    2. wrky11 and wrky17 are not strictly limited to plant defense responses but are also involved in conferring stress tolerance.
      Title: Transcription factors WRKY11 and WRKY17 are involved in abiotic stress responses in Arabidopsis.
    3. Bacillus cereus AR156 treatment significantly stimulated the transcription of WRKY70, but suppressed that of WRKY11 in Arabidopsis leaves. They were shown to be required for AR156 enhancing the activation of cellular defence responses.
      Title: Transcription factors WRKY70 and WRKY11 served as regulators in rhizobacterium Bacillus cereus AR156-induced systemic resistance to Pseudomonas syringae pv. tomato DC3000 in Arabidopsis.
    4. Data show that even subtle amino acid substitutions within the DNA binding region of AtWRKY11 strongly impinge on its binding activity.
      Title: Studies on DNA-binding selectivity of WRKY transcription factors lend structural clues into WRKY-domain function.
    5. These results provide genetic evidence for the importance of WRKY11 and WRKY17 in plant defense.
      Title: The transcription factors WRKY11 and WRKY17 act as negative regulators of basal resistance in Arabidopsis thaliana.
    Submit: New GeneRIF Correction

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    NM_001342092.1
    NM_119304.4
    NM_179228.2

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables DNA-binding transcription factor activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables DNA-binding transcription factor activity ISS
    Inferred from Sequence or Structural Similarity
    more info
    		 PubMed 
    enables calmodulin binding IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    enables sequence-specific DNA binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables transcription cis-regulatory region binding IPI
    Inferred from Physical Interaction
    more info
    		 PubMed 
    Process Evidence Code Pubs
    acts_upstream_of_or_within defense response to bacterium IEP
    Inferred from Expression Pattern
    more info
    		 PubMed 
    involved_in defense response to bacterium IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    involved_in induced systemic resistance IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    involved_in regulation of DNA-templated transcription IEA
    Inferred from Electronic Annotation
    more info
    		  
    involved_in regulation of jasmonic acid mediated signaling pathway IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    involved_in response to bacterium IEP
    Inferred from Expression Pattern
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in nucleus IC
    Inferred by Curator
    more info
    		 PubMed 
    located_in nucleus IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    located_in nucleus ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    WRKY DNA-binding protein 11
    NP_567878.2
    • WRKY DNA-binding protein 11 (WRKY11); CONTAINS InterPro DOMAIN/s: DNA-binding WRKY (InterPro:IPR003657), Transcription factor, WRKY, Zn-cluster (InterPro:IPR018872); BEST Arabidopsis thaliana protein match is: WRKY DNA-binding protein 17 (TAIR:AT2G24570.1); Has 3338 Blast hits to 2891 proteins in 186 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 3320; Viruses - 0; Other Eukaryotes - 18 (source: NCBI BLink).
    NP_849559.1
    • WRKY DNA-binding protein 11 (WRKY11); CONTAINS InterPro DOMAIN/s: DNA-binding WRKY (InterPro:IPR003657), Transcription factor, WRKY, Zn-cluster (InterPro:IPR018872); BEST Arabidopsis thaliana protein match is: WRKY DNA-binding protein 17 (TAIR:AT2G24570.1); Has 3379 Blast hits to 2932 proteins in 187 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 3363; Viruses - 0; Other Eukaryotes - 16 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003075.7 Reference assembly

      Range
      15289788..15291934 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_119304.4 → NP_567878.2  WRKY DNA-binding protein 11 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_567878.2

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178V6A8, A0A5S9XXM6, A0A7G2F7I2
      Conserved Domains (2) summary
      pfam03106
      Location:246 → 302
      WRKY; WRKY DNA -binding domain
      pfam10533
      Location:200 → 242
      Plant_zn_clust; Plant zinc cluster domain

    2. NM_001342092.1 → NP_001329649.1  WRKY DNA-binding protein 11 [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A1P8B8D0, A0A7G2F7I2
      Conserved Domains (2) summary
      pfam10533
      Location:200 → 242
      Plant_zn_clust; Plant zinc cluster domain
      cl03892
      Location:244 → 265
      WRKY; WRKY DNA -binding domain

    3. NM_179228.2 → NP_849559.1  WRKY DNA-binding protein 11 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_849559.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q8H1G1, Q93YX0, Q9SV15
      UniProtKB/TrEMBL
      A0A7G2F8Z3
      Conserved Domains (2) summary
      smart00774
      Location:245 → 303
      WRKY; DNA binding domain
      pfam10533
      Location:211 → 243
      Plant_zn_clust; Plant zinc cluster domain
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9SV15.2

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