U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    RGP1 reversibly glycosylated polypeptide 1 [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 821233, updated on 18-Sep-2024

    Summary

    Go to the top of the page Help
    Official Symbol
    RGP1
    Official Full Name
    reversibly glycosylated polypeptide 1
    Primary source
    TAIR:AT3G02230
    Locus tag
    AT3G02230
    See related
    Araport:AT3G02230
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    ARABIDOPSIS THALIANA REVERSIBLY GLYCOSYLATED POLYPEPTIDE 1; ATRGP1; F14P3.12; F14P3_12; reversibly glycosylated polypeptide 1
    Summary
    RGP1 is a UDP-arabinose mutase that catalyzes the interconversion between the pyranose and furanose forms of UDP-L-arabinose. It appears to be required for proper cell wall formation. rgp1/rgp2 (at5g15650) double mutants have a male gametophyte lethal phenotype. RGP1 fusion proteins can be found in the cytosol and peripherally associated with the Golgi apparatus.
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See RGP1 in Genome Data Viewer
    Location:
    chromosome: 3
    Exon count:
    4
    Sequence:
    Chromosome: 3; NC_003074.8 (415389..417723)

    Chromosome 3 - NC_003074.8Genomic Context describing neighboring genes Neighboring gene Proteasome component (PCI) domain protein Neighboring gene COBRA-like protein 1 precursor Neighboring gene small acidic-like protein Neighboring gene root meristem growth factor-like protein Neighboring gene root meristem growth factor-like protein

    Genomic regions, transcripts, and products

    Go to the top of the page Help
    Genomic Sequence:
    NC_003074.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. The constitutive expression of Arabidopsis plasmodesmal-associated class 1 reversibly glycosylated polypeptide impairs plant development and virus spread. Zavaliev R, et al. J Exp Bot, 2010. PMID 19887501, Free PMC Article
    2. Arabidopsis reversibly glycosylated polypeptides 1 and 2 are essential for pollen development. Drakakaki G, et al. Plant Physiol, 2006 Dec. PMID 17071651, Free PMC Article
    3. A reversibly glycosylated polypeptide (RGP1) possibly involved in plant cell wall synthesis: purification, gene cloning, and trans-Golgi localization. Dhugga KS, et al. Proc Natl Acad Sci U S A, 1997 Jul 8. PMID 9207152, Free PMC Article
    4. Cloning and characterization of AtRGP1. A reversibly autoglycosylated arabidopsis protein implicated in cell wall biosynthesis. Delgado IJ, et al. Plant Physiol, 1998 Apr. PMID 9536051, Free PMC Article
    5. The interconversion of UDP-arabinopyranose and UDP-arabinofuranose is indispensable for plant development in Arabidopsis. Rautengarten C, et al. Plant Cell, 2011 Apr. PMID 21478444, Free PMC Article

    See all (14) citations in PubMed

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?
    1. Overexpression of the AtRGP2:green fluorescent proteins leads to a reduction in plasmodesmata permeability to photoassimilate.
      Title: The constitutive expression of Arabidopsis plasmodesmal-associated class 1 reversibly glycosylated polypeptide impairs plant development and virus spread.
    2. RGP1 is required during microspore development and pollen mitosis, either affecting cell division and/or vacuolar integrity.
      Title: Arabidopsis reversibly glycosylated polypeptides 1 and 2 are essential for pollen development.
    Submit: New GeneRIF Correction

    Interactions

    Go to the top of the page Help
    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

    Go to the top of the page Help

    Homology

    NM_111090.4

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables UDP-arabinopyranose mutase activity IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    enables cellulose synthase (UDP-forming) activity ISS
    Inferred from Sequence or Structural Similarity
    more info
    		 PubMed 
    enables intramolecular transferase activity IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    enables protein binding IPI
    Inferred from Physical Interaction
    more info
    		 PubMed 
    Process Evidence Code Pubs
    acts_upstream_of_or_within UDP-L-arabinose metabolic process IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    acts_upstream_of_or_within plant-type cell wall biogenesis NAS
    Non-traceable Author Statement
    more info
    		  
    acts_upstream_of_or_within plant-type cell wall biogenesis TAS
    Traceable Author Statement
    more info
    		 PubMed 
    involved_in plant-type cell wall organization or biogenesis IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    involved_in pollen development IGI
    Inferred from Genetic Interaction
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in Golgi apparatus IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    located_in Golgi stack IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    located_in Golgi trans cisterna IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    located_in cytosol HDA PubMed 
    located_in cytosol IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    located_in cytosolic ribosome HDA PubMed 
    located_in nucleus ISM
    Inferred from Sequence Model
    more info
    		  
    located_in plant-type cell wall HDA PubMed 
    located_in plant-type vacuole HDA PubMed 

    General protein information

    Go to the top of the page Help
    Preferred Names
    reversibly glycosylated polypeptide 1
    NP_186872.1
    • reversibly glycosylated polypeptide 1 (RGP1); FUNCTIONS IN: cellulose synthase (UDP-forming) activity; INVOLVED IN: response to salt stress, plant-type cell wall biogenesis; LOCATED IN: cytosolic ribosome, Golgi stack, cell wall, plasma membrane, Golgi trans cisterna; EXPRESSED IN: 7 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, seed development stages; CONTAINS InterPro DOMAIN/s: Alpha-1,4-glucan-protein synthase, UDP-forming (InterPro:IPR004901); BEST Arabidopsis thaliana protein match is: reversibly glycosylated polypeptide 2 (TAIR:AT5G15650.1); Has 260 Blast hits to 255 proteins in 45 species: Archae - 24; Bacteria - 8; Metazoa - 0; Fungi - 0; Plants - 224; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003074.8 Reference assembly

      Range
      415389..417723
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_111090.4 → NP_186872.1  reversibly glycosylated polypeptide 1 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_186872.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      O22427, Q9SRT9, W8PVH6
      UniProtKB/TrEMBL
      A0A178VK37, A0A5S9X8H2
      Conserved Domains (1) summary
      PLN03180
      Location:16 → 355
      PLN03180; reversibly glycosylated polypeptide; Provisional
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9SRT9.1

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

    Other Literature Sources
    Molecular Biology Databases
    Research Materials
    Tools