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    esterase/lipase/thioesterase family protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 824243, updated on 18-Sep-2024

    Summary

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    Official Full Name
    esterase/lipase/thioesterase family protein
    Primary source
    TAIR:AT3G50790
    Locus tag
    AT3G50790
    See related
    Araport:AT3G50790
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
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    Genomic context

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    Location:
    chromosome: 3
    Exon count:
    8
    Sequence:
    Chromosome: 3; NC_003074.8 (18879893..18882237, complement)

    Chromosome 3 - NC_003074.8Genomic Context describing neighboring genes Neighboring gene calmodulin-like 41 Neighboring gene BTB/POZ domain protein Neighboring gene uncharacterized protein Neighboring gene PLATZ transcription factor family protein Neighboring gene Uncharacterized protein family (UPF0497)

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003074.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Global Analysis of Membrane-associated Protein Oligomerization Using Protein Correlation Profiling. McBride Z, et al. Mol Cell Proteomics, 2017 Nov. PMID 28887381, Free PMC Article
    2. Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana. Salanoubat M, et al. Nature, 2000 Dec 14. PMID 11130713

    GeneRIFs: Gene References Into Functions

    General gene information

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    NM_001339481.1
    NM_114939.3

    Gene Ontology Provided by TAIR

    Component Evidence Code Pubs
    located_in chloroplast ISM
    Inferred from Sequence Model
    more info
    		  
    located_in cytosol HDA PubMed 

    General protein information

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    Preferred Names
    esterase/lipase/thioesterase family protein
    NP_190648.1
    • esterase/lipase/thioesterase family protein; FUNCTIONS IN: hydrolase activity, carboxylesterase activity; INVOLVED IN: embryo development ending in seed dormancy; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Uncharacterised protein family UPF0017, hydrolase-like, conserved site (InterPro:IPR000952), AB-hydrolase YheT, putative (InterPro:IPR012020), Alpha/beta hydrolase fold-1 (InterPro:IPR000073); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT5G49950.1); Has 2554 Blast hits to 2547 proteins in 951 species: Archae - 0; Bacteria - 1494; Metazoa - 334; Fungi - 200; Plants - 135; Viruses - 0; Other Eukaryotes - 391 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003074.8 Reference assembly

      Range
      18879893..18882237 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_114939.3 → NP_190648.1  esterase/lipase/thioesterase family protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_190648.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178VKA3, Q9SVL9
      Conserved Domains (2) summary
      PLN02511
      Location:19 → 401
      PLN02511; hydrolase
      cl21494
      Location:55 → 387
      Abhydrolase; alpha/beta hydrolases

    2. NM_001339481.1 → NP_001326079.1  esterase/lipase/thioesterase family protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178VKA3, Q9SVL9
    Nucleotide Protein
    Heading Accession and Version

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