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    GAMMA CAL2 gamma carbonic anhydrase-like 2 [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 824029, updated on 18-Sep-2024

    Summary

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    Official Symbol
    GAMMA CAL2
    Official Full Name
    gamma carbonic anhydrase-like 2
    Primary source
    TAIR:AT3G48680
    Locus tag
    AT3G48680
    See related
    Araport:AT3G48680
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    AtCAL2; gamma carbonic anhydrase-like 2
    Summary
    Encodes a mitochondrial gamma carbonic anhydrase-like protein. Component of the NADH dehydrogenase complex.
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    Genomic context

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    See GAMMA CAL2 in Genome Data Viewer
    Location:
    chromosome: 3
    Exon count:
    2
    Sequence:
    Chromosome: 3; NC_003074.8 (18034935..18037041)

    Chromosome 3 - NC_003074.8Genomic Context describing neighboring genes Neighboring gene XH/XS domain-containing protein Neighboring gene egg cell-secreted-like protein (DUF1278) Neighboring gene alpha/beta-Hydrolases superfamily protein Neighboring gene carboxyesterase 13

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003074.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. The γ-carbonic anhydrase subcomplex of mitochondrial complex I is essential for development and important for photomorphogenesis of Arabidopsis. Wang Q, et al. Plant Physiol, 2012 Nov. PMID 22991283, Free PMC Article
    2. The genetic and physiological analysis of late-flowering phenotype of T-DNA insertion mutants of AtCAL1 and AtCAL2 in Arabidopsis. Zhang J, et al. Mol Biol Rep, 2012 Feb. PMID 21695426
    3. Functional characterization of mutants affected in the carbonic anhydrase domain of the respiratory complex I in Arabidopsis thaliana. Soto D, et al. Plant J, 2015 Sep. PMID 26148112
    4. Gamma carbonic anhydrase like complex interact with plant mitochondrial complex I. Perales M, et al. Plant Mol Biol, 2004 Dec. PMID 15821992
    5. Carbonic anhydrase subunits form a matrix-exposed domain attached to the membrane arm of mitochondrial complex I in plants. Sunderhaus S, et al. J Biol Chem, 2006 Mar 10. PMID 16407270

    See all (19) citations in PubMed

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?
    1. At3g48680 contributes to sustaining efficient photosynthesis under ambient (photorespiratory) conditions.
      Title: Functional characterization of mutants affected in the carbonic anhydrase domain of the respiratory complex I in Arabidopsis thaliana.
    2. A genetic study of the genes gammaCAL1 and gammaCAL2 that encode two subunits of the gammaCA subcomplex of mitochondrial complex I, is reported.
      Title: The γ-carbonic anhydrase subcomplex of mitochondrial complex I is essential for development and important for photomorphogenesis of Arabidopsis.
    Submit: New GeneRIF Correction

    Pathways from PubChem

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    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    NM_114727.4

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables protein binding IPI
    Inferred from Physical Interaction
    more info
    		 PubMed 
    Process Evidence Code Pubs
    acts_upstream_of_or_within photorespiration TAS
    Traceable Author Statement
    more info
    		 PubMed 
    acts_upstream_of_or_within response to abscisic acid IGI
    Inferred from Genetic Interaction
    more info
    		 PubMed 
    acts_upstream_of_or_within response to salt stress IGI
    Inferred from Genetic Interaction
    more info
    		 PubMed 
    acts_upstream_of_or_within vegetative to reproductive phase transition of meristem IGI
    Inferred from Genetic Interaction
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in chloroplast ISM
    Inferred from Sequence Model
    more info
    		  
    located_in cytosol HDA PubMed 
    located_in mitochondrial membrane IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    located_in mitochondrion HDA PubMed 
    located_in mitochondrion IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    located_in plant-type vacuole HDA PubMed 
    part_of respiratory chain complex I HDA PubMed 
    part_of respiratory chain complex I IDA
    Inferred from Direct Assay
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    gamma carbonic anhydrase-like 2
    NP_190437.1
    • gamma carbonic anhydrase-like 2 (GAMMA CAL2); FUNCTIONS IN: transferase activity; INVOLVED IN: photorespiration; LOCATED IN: in 6 components; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Trimeric LpxA-like (InterPro:IPR011004); BEST Arabidopsis thaliana protein match is: gamma carbonic anhydrase like 1 (TAIR:AT5G63510.1); Has 6263 Blast hits to 6236 proteins in 1756 species: Archae - 151; Bacteria - 4130; Metazoa - 15; Fungi - 10; Plants - 165; Viruses - 0; Other Eukaryotes - 1792 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003074.8 Reference assembly

      Range
      18034935..18037041
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_114727.4 → NP_190437.1  gamma carbonic anhydrase-like 2 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_190437.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q9SMN1
      UniProtKB/TrEMBL
      A0A178VI68, A0A5S9XJ47
      Conserved Domains (2) summary
      cd04645
      Location:71 → 228
      LbH_gamma_CA_like; Gamma carbonic anhydrase-like: This family is composed of gamma carbonic anhydrase (CA), Ferripyochelin Binding Protein (FBP), E. coli paaY protein, and similar proteins. CAs are zinc-containing enzymes that catalyze the reversible hydration of carbon ...
      PLN02472
      Location:2 → 256
      PLN02472; uncharacterized protein
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9SMN1.1

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