U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    CARAB-AK-LYS Aspartate kinase family protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 831255, updated on 18-Sep-2024

    Summary

    Go to the top of the page Help
    Official Symbol
    CARAB-AK-LYS
    Official Full Name
    Aspartate kinase family protein
    Primary source
    TAIR:AT5G14060
    Locus tag
    AT5G14060
    See related
    Araport:AT5G14060
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    ASPARTATE KINASE; MUA22.6; MUA22_6
    Summary
    lysine-sensitive aspartate kinase
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See CARAB-AK-LYS in Genome Data Viewer
    Location:
    chromosome: 5
    Exon count:
    14
    Sequence:
    Chromosome: 5; NC_003076.8 (4535367..4539323)

    Chromosome 5 - NC_003076.8Genomic Context describing neighboring genes Neighboring gene phosphate transporter 3;1 Neighboring gene Transducin/WD40 repeat-like superfamily protein Neighboring gene ncRNA Neighboring gene Thioredoxin superfamily protein

    Genomic regions, transcripts, and products

    Go to the top of the page Help
    Genomic Sequence:
    NC_003076.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. Cloning and expression of an Arabidopsis thaliana cDNA encoding a monofunctional aspartate kinase homologous to the lysine-sensitive enzyme of Escherichia coli. Tang G, et al. Plant Mol Biol, 1997 May. PMID 9207844
    2. Allosteric monofunctional aspartate kinases from Arabidopsis. Curien G, et al. FEBS J, 2007 Jan. PMID 17140415
    3. Analysis of Loss-of-Function Mutants in Aspartate Kinase and Homoserine Dehydrogenase Genes Points to Complexity in the Regulation of Aspartate-Derived Amino Acid Contents. Clark TJ, et al. Plant Physiol, 2015 Aug. PMID 26063505, Free PMC Article
    4. AT_CHLORO, a comprehensive chloroplast proteome database with subplastidial localization and curated information on envelope proteins. Ferro M, et al. Mol Cell Proteomics, 2010 Jun. PMID 20061580, Free PMC Article
    5. Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana. Tabata S, et al. Nature, 2000 Dec 14. PMID 11130714

    GeneRIFs: Gene References Into Functions

    Pathways from PubChem

    Go to the top of the page

    General gene information

    Go to the top of the page Help
    NM_001085112.2
    NM_001343314.1
    NM_121409.4

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables aspartate kinase activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    Process Evidence Code Pubs
    acts_upstream_of_or_within aspartate family amino acid biosynthetic process TAS
    Traceable Author Statement
    more info
    		 PubMed 
    involved_in lysine biosynthetic process via diaminopimelate IEA
    Inferred from Electronic Annotation
    more info
    		  
    involved_in threonine biosynthetic process IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    located_in chloroplast ISM
    Inferred from Sequence Model
    more info
    		  
    located_in chloroplast stroma HDA PubMed 

    General protein information

    Go to the top of the page Help
    Preferred Names
    Aspartate kinase family protein
    NP_001078581.1
    • CARAB-AK-LYS; FUNCTIONS IN: amino acid binding, aspartate kinase activity; INVOLVED IN: aspartate family amino acid biosynthetic process; CONTAINS InterPro DOMAIN/s: Aspartate kinase, conserved site (InterPro:IPR018042), Aspartate/glutamate/uridylate kinase (InterPro:IPR001048), Amino acid-binding ACT (InterPro:IPR002912), Aspartate kinase domain (InterPro:IPR001341); BEST Arabidopsis thaliana protein match is: aspartate kinase 3 (TAIR:AT3G02020.1); Has 11053 Blast hits to 11025 proteins in 2540 species: Archae - 202; Bacteria - 7605; Metazoa - 4; Fungi - 146; Plants - 183; Viruses - 0; Other Eukaryotes - 2913 (source: NCBI BLink).
    NP_196910.1
    • CARAB-AK-LYS; FUNCTIONS IN: amino acid binding, aspartate kinase activity; INVOLVED IN: aspartate family amino acid biosynthetic process; CONTAINS InterPro DOMAIN/s: Aspartate kinase, conserved site (InterPro:IPR018042), Aspartate/glutamate/uridylate kinase (InterPro:IPR001048), Amino acid-binding ACT (InterPro:IPR002912), Aspartate kinase domain (InterPro:IPR001341); BEST Arabidopsis thaliana protein match is: aspartate kinase 3 (TAIR:AT3G02020.1); Has 11053 Blast hits to 11025 proteins in 2540 species: Archae - 202; Bacteria - 7605; Metazoa - 4; Fungi - 146; Plants - 183; Viruses - 0; Other Eukaryotes - 2913 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003076.8 Reference assembly

      Range
      4535367..4539323
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_121409.4 → NP_196910.1  Aspartate kinase family protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_196910.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      O23653, Q9FMU4, Q9FY44
      UniProtKB/TrEMBL
      A0A178UPF4, A0A5S9Y4I6
      Conserved Domains (1) summary
      PLN02551
      Location:31 → 543
      PLN02551; aspartokinase

    2. NM_001085112.2 → NP_001078581.1  Aspartate kinase family protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_001078581.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      O23653, Q9FMU4, Q9FY44
      UniProtKB/TrEMBL
      A0A178UPF4, A0A5S9Y4I6
      Conserved Domains (1) summary
      PLN02551
      Location:31 → 543
      PLN02551; aspartokinase

    3. NM_001343314.1 → NP_001330615.1  Aspartate kinase family protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A1P8BBD5, A0A5S9Y4I6
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    O23653.2

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.