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    RBCS1B Ribulose bisphosphate carboxylase (small chain) family protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 833830, updated on 18-Sep-2024

    Summary

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    Official Symbol
    RBCS1B
    Official Full Name
    Ribulose bisphosphate carboxylase (small chain) family protein
    Primary source
    TAIR:AT5G38430
    Locus tag
    AT5G38430
    See related
    Araport:AT5G38430
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    MXI10.15; MXI10_15; Rubisco small subunit 1B
    Summary
    Encodes a member of the Rubisco small subunit (RBCS) multigene family: RBCS1A (At1g67090), RBCS1B (At5g38430), RBCS2B (At5g38420), and RBCS3B (At5g38410).
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    Genomic context

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    See RBCS1B in Genome Data Viewer
    Location:
    chromosome: 5
    Exon count:
    3
    Sequence:
    Chromosome: 5; NC_003076.8 (15383167..15385320, complement)

    Chromosome 5 - NC_003076.8Genomic Context describing neighboring genes Neighboring gene ncRNA Neighboring gene ncRNA Neighboring gene Ribulose bisphosphate carboxylase (small chain) family protein Neighboring gene S-protein homologue 8 Neighboring gene pseudo

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003076.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Initial characteristics of RbcX proteins from Arabidopsis thaliana. Kolesiński P, et al. Plant Mol Biol, 2011 Nov. PMID 21922322, Free PMC Article
    2. Cosuppression of RBCS3B in Arabidopsis leads to severe photoinhibition caused by ROS accumulation. Zhan GM, et al. Plant Cell Rep, 2014 Jul. PMID 24682522
    3. Arabidopsis scaffold protein RACK1A interacts with diverse environmental stress and photosynthesis related proteins. Kundu N, et al. Plant Signal Behav, 2013 May. PMID 23435172, Free PMC Article
    4. A split-ubiquitin yeast two-hybrid screen to examine the substrate specificity of atToc159 and atToc132, two Arabidopsis chloroplast preprotein import receptors. Dutta S, et al. PLoS One, 2014. PMID 24736607, Free PMC Article
    5. High light response of the thylakoid proteome in arabidopsis wild type and the ascorbate-deficient mutant vtc2-2. A comparative proteomics study. Giacomelli L, et al. Plant Physiol, 2006 Jun. PMID 16648217, Free PMC Article

    See all (20) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Pathways from PubChem

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    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    NM_001344249.1
    NM_123204.4

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables mRNA binding IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in apoplast HDA PubMed 
    located_in chloroplast HDA PubMed 
    located_in chloroplast ISM
    Inferred from Sequence Model
    more info
    		  
    located_in chloroplast envelope HDA PubMed 
    located_in chloroplast stroma HDA PubMed 
    located_in plastid HDA PubMed 
    located_in thylakoid HDA PubMed 

    General protein information

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    Preferred Names
    Ribulose bisphosphate carboxylase (small chain) family protein
    NP_001318696.1
    • Ribulose bisphosphate carboxylase (small chain) family protein; FUNCTIONS IN: ribulose-bisphosphate carboxylase activity; INVOLVED IN: carbon fixation, response to blue light, response to red light, response to far red light; LOCATED IN: in 7 components; EXPRESSED IN: 14 plant structures; EXPRESSED DURING: seedling growth; CONTAINS InterPro DOMAIN/s: Ribulose bisphosphate carboxylase, small chain (InterPro:IPR000894); BEST Arabidopsis thaliana protein match is: Ribulose bisphosphate carboxylase (small chain) family protein (TAIR:AT5G38420.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003076.8 Reference assembly

      Range
      15383167..15385320 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001344249.1 → NP_001318696.1  Ribulose bisphosphate carboxylase (small chain) family protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      P10796
      UniProtKB/TrEMBL
      A0A5S9YBC0, A0A654G639, A0A7G2FEU3
      Conserved Domains (1) summary
      PLN02289
      Location:1 → 176
      PLN02289; ribulose-bisphosphate carboxylase small chain

    2. NM_123204.4 → NP_198659.1  Ribulose bisphosphate carboxylase (small chain) family protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_198659.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      P10796
      UniProtKB/TrEMBL
      A0A5S9YBC0, A0A654G639, A0A7G2FEU3
      Conserved Domains (1) summary
      PLN02289
      Location:1 → 176
      PLN02289; ribulose-bisphosphate carboxylase small chain
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    P10796.1

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