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    Gm34220 predicted gene, 34220 [ Mus musculus (house mouse) ]

    Gene ID: 102637400, updated on 2-Nov-2024

    Summary

    Official Symbol
    Gm34220provided by MGI
    Official Full Name
    predicted gene, 34220provided by MGI
    Primary source
    MGI:MGI:5593379
    See related
    Ensembl:ENSMUSG00000114045 AllianceGenome:MGI:5593379
    Gene type
    ncRNA
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    Gm40573; Linc-YY1
    Summary
    Involved in skeletal muscle cell differentiation and skeletal muscle tissue regeneration. Is expressed in embryo; limb muscle; and myotome. [provided by Alliance of Genome Resources, Nov 2024]
    Expression
    Ubiquitous expression in adrenal adult (RPKM 4.1), ovary adult (RPKM 3.3) and 28 other tissues See more
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    Genomic context

    See Gm34220 in Genome Data Viewer
    Location:
    12 F1; 12
    Exon count:
    4
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 12 NC_000078.7 (108744781..108758647, complement)

    Chromosome 12 - NC_000078.7Genomic Context describing neighboring genes Neighboring gene STARR-positive B cell enhancer ABC_E1156 Neighboring gene predicted gene, 33628 Neighboring gene CapStarr-seq enhancer MGSCv37_chr12:110004036-110004330 Neighboring gene predicted gene, 33682 Neighboring gene STARR-positive B cell enhancer ABC_E11524 Neighboring gene YY1 transcription factor Neighboring gene solute carrier family 25 (mitochondrial carrier, palmitoylcarnitine transporter), member 29 Neighboring gene STARR-positive B cell enhancer ABC_E7179 Neighboring gene predicted gene, 53767

    Genomic regions, transcripts, and products

    Genomic Sequence:
    NC_000078.7 Chromosome 12 Reference GRCm39 C57BL/6J

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    RNA

    1. NR_189041.1 RNA Sequence

      Status: VALIDATED

      Source sequence(s)
      AC152061
    2. NR_189042.1 RNA Sequence

      Status: VALIDATED

      Source sequence(s)
      AC152061
      Related
      ENSMUST00000223001.2
    3. NR_190288.1 RNA Sequence

      Status: VALIDATED

      Source sequence(s)
      AC152061
    4. NR_190289.1 RNA Sequence

      Status: VALIDATED

      Source sequence(s)
      AC152061

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000078.7 Reference GRCm39 C57BL/6J

      Range
      108744781..108758647 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)