U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    Gm5602 predicted gene 5602 [ Mus musculus (house mouse) ]

    Gene ID: 434249, updated on 17-Aug-2024

    Summary

    Official Symbol
    Gm5602provided by MGI
    Official Full Name
    predicted gene 5602provided by MGI
    Primary source
    MGI:MGI:3645136
    See related
    AllianceGenome:MGI:3645136
    Gene type
    ncRNA
    RefSeq status
    MODEL
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    EG434249
    Expression
    Broad expression in colon adult (RPKM 2.1), small intestine adult (RPKM 2.0) and 24 other tissues See more
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    See Gm5602 in Genome Data Viewer
    Location:
    7 F3; 7 73.19 cM
    Exon count:
    4
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 7 NC_000073.7 (130464178..130494461, complement)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 7 NC_000073.6 (130862448..130873873, complement)

    Chromosome 7 - NC_000073.7Genomic Context describing neighboring genes Neighboring gene BTB domain containing 16 Neighboring gene STARR-seq mESC enhancer starr_20267 Neighboring gene STARR-positive B cell enhancer ABC_E8213 Neighboring gene predicted gene, 53377 Neighboring gene pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 1 Neighboring gene STARR-seq mESC enhancer starr_20271 Neighboring gene microRNA 7061 Neighboring gene STARR-seq mESC enhancer starr_20273 Neighboring gene STARR-seq mESC enhancer starr_20276 Neighboring gene HtrA serine peptidase 1 Neighboring gene STARR-seq mESC enhancer starr_20277

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    General gene information

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
     
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
     
    Component Evidence Code Pubs
    is_active_in cellular_component ND
    No biological Data available
    more info
     

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000073.7 Reference GRCm39 C57BL/6J

      Range
      130464178..130494461 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    RNA

    1. XR_004934288.1 RNA Sequence