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These reference sequences exist independently of genome builds. Explain
These reference sequences are curated independently of the genome
annotation cycle, so their versions may not match the RefSeq versions in the current
genome build. Identify version mismatches by comparing the version of the RefSeq in
this section to the one reported in Genomic regions,
transcripts, and products above.
mRNA and Protein(s)
-
NM_028242.2 → NP_082518.1 17S U2 SnRNP complex component HTATSF1
Status: VALIDATED
- Description
- Transcript Variant: This variant (1) represents the longer transcript. Variants 1 and 2 encode the same protein.
- Source sequence(s)
-
AL672263
- Consensus CDS
-
CCDS40983.1
- UniProtKB/Swiss-Prot
- B1AVC7, Q1WWK0, Q8BGC0, Q9CT41, Q9DAU3
- Related
- ENSMUSP00000086027.6, ENSMUST00000088652.6
- Conserved Domains (3) summary
-
- COG0724
Location:89 → 219
- RRM; RNA recognition motif (RRM) domain [Translation, ribosomal structure and biogenesis]
- cd12281
Location:133 → 223
- RRM1_TatSF1_like; RNA recognition motif 1 in HIV Tat-specific factor 1 (Tat-SF1) and similar proteins
- cd12282
Location:264 → 354
- RRM2_TatSF1_like; RNA recognition motif 2 in HIV Tat-specific factor 1 (Tat-SF1) and similar proteins
-
NM_029371.1 → NP_083647.1 17S U2 SnRNP complex component HTATSF1
Status: VALIDATED
- Description
- Transcript Variant: This variant (2) differs in the 5' UTR, compared to variant 1. Variants 1 and 2 encode the same protein.
- Source sequence(s)
-
AI849205, AK049495, BG077525, BY134418
- Consensus CDS
-
CCDS40983.1
- UniProtKB/Swiss-Prot
- B1AVC7, Q1WWK0, Q8BGC0, Q9CT41, Q9DAU3
- Conserved Domains (3) summary
-
- COG0724
Location:89 → 219
- RRM; RNA recognition motif (RRM) domain [Translation, ribosomal structure and biogenesis]
- cd12281
Location:133 → 223
- RRM1_TatSF1_like; RNA recognition motif 1 in HIV Tat-specific factor 1 (Tat-SF1) and similar proteins
- cd12282
Location:264 → 354
- RRM2_TatSF1_like; RNA recognition motif 2 in HIV Tat-specific factor 1 (Tat-SF1) and similar proteins
The following sections contain reference sequences that belong to a
specific genome build. Explain
This section includes genomic Reference
Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as
RefSeqs for chromosomes and scaffolds (contigs) from both reference and alternate
assemblies. Model RNAs and proteins are also reported here.
Reference GRCm39 C57BL/6J
Genomic
-
NC_000086.8 Reference GRCm39 C57BL/6J
- Range
-
56098930..56112543
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)