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These reference sequences exist independently of genome builds. Explain
These reference sequences are curated independently of the genome
annotation cycle, so their versions may not match the RefSeq versions in the current
genome build. Identify version mismatches by comparing the version of the RefSeq in
this section to the one reported in Genomic regions,
transcripts, and products above.
mRNA and Protein(s)
-
NM_001310595.1 → NP_001297524.1 proteasome subunit alpha type-3 isoform b
See identical proteins and their annotated locations for NP_001297524.1
Status: VALIDATED
- Description
- Transcript Variant: This variant (2) differs in the 5' structure, lacks a portion of the 5' coding region, and initiates translation at a downstream start site, compared to variant 1. The encoded isoform (b) has a shorter N-terminus compared to isoform a. Variants 2 and 3 encode the same isoform.
- Source sequence(s)
-
AC132325, AI303320, AK169577, BY159585
- Consensus CDS
-
CCDS79119.1
- UniProtKB/TrEMBL
- E0CX62, Q3TEL1
- Related
- ENSMUSP00000124894.3, ENSMUST00000160864.8
- Conserved Domains (1) summary
-
- cl00467
Location:1 → 142
- Ntn_hydrolase; The Ntn hydrolases (N-terminal nucleophile) are a diverse superfamily of of enzymes that are activated autocatalytically via an N-terminally lcated nucleophilic amino acid. N-terminal nucleophile (NTN-) hydrolase superfamily, which contains a ...
-
NM_001310596.1 → NP_001297525.1 proteasome subunit alpha type-3 isoform b
See identical proteins and their annotated locations for NP_001297525.1
Status: VALIDATED
- Description
- Transcript Variant: This variant (3) differs in the 5' structure, lacks a portion of the 5' coding region, and initiates translation at a downstream start site, compared to variant 1. The encoded isoform (b) has a shorter N-terminus compared to isoform a. Variants 2 and 3 encode the same isoform.
- Source sequence(s)
-
AC132325
- Consensus CDS
-
CCDS79119.1
- UniProtKB/TrEMBL
- E0CX62, Q3TEL1
- Conserved Domains (1) summary
-
- cl00467
Location:1 → 142
- Ntn_hydrolase; The Ntn hydrolases (N-terminal nucleophile) are a diverse superfamily of of enzymes that are activated autocatalytically via an N-terminally lcated nucleophilic amino acid. N-terminal nucleophile (NTN-) hydrolase superfamily, which contains a ...
-
NM_001423038.1 → NP_001409967.1 proteasome subunit alpha type-3 isoform a
Status: VALIDATED
- Source sequence(s)
-
AC132325
- UniProtKB/Swiss-Prot
-
O70435
- UniProtKB/TrEMBL
- Q58EV4, Q9DCD8
-
NM_001423040.1 → NP_001409969.1 proteasome subunit alpha type-3 isoform b
Status: VALIDATED
- Source sequence(s)
-
AC132325
- UniProtKB/TrEMBL
- E0CX62, Q3TEL1
-
NM_001423041.1 → NP_001409970.1 proteasome subunit alpha type-3 isoform c
Status: VALIDATED
- Source sequence(s)
-
AC132325
- UniProtKB/TrEMBL
-
Q3TEL1
-
NM_001423042.1 → NP_001409971.1 proteasome subunit alpha type-3 isoform c
Status: VALIDATED
- Source sequence(s)
-
AC132325
- UniProtKB/TrEMBL
-
Q3TEL1
-
NM_001423045.1 → NP_001409974.1 proteasome subunit alpha type-3 isoform a
Status: VALIDATED
- Source sequence(s)
-
AC132325
- UniProtKB/Swiss-Prot
-
O70435
- UniProtKB/TrEMBL
- Q58EV4, Q9DCD8
-
NM_011184.5 → NP_035314.3 proteasome subunit alpha type-3 isoform a
See identical proteins and their annotated locations for NP_035314.3
Status: VALIDATED
- Description
- Transcript Variant: This variant (1) represents the longest transcript and encodes the longer isoform (a).
- Source sequence(s)
-
AC132325, AI303320, AK168495, BY159585
- Consensus CDS
-
CCDS25961.1
- UniProtKB/Swiss-Prot
-
O70435
- UniProtKB/TrEMBL
- Q58EV4, Q9DCD8
- Related
- ENSMUSP00000125548.2, ENSMUST00000160027.8
- Conserved Domains (1) summary
-
- cd03751
Location:5 → 217
- proteasome_alpha_type_3; The 20S proteasome, multisubunit proteolytic complex, is the central enzyme of nonlysosomal protein degradation in both the cytosol and nucleus. It is composed of 28 subunits arranged as four homoheptameric rings that stack on top of one another forming ...
The following sections contain reference sequences that belong to a
specific genome build. Explain
This section includes genomic Reference
Sequences (RefSeqs) from all assemblies on which this gene is annotated, such as
RefSeqs for chromosomes and scaffolds (contigs) from both reference and alternate
assemblies. Model RNAs and proteins are also reported here.
Reference GRCm39 C57BL/6J
Genomic
-
NC_000078.7 Reference GRCm39 C57BL/6J
- Range
-
71016082..71042651
- Download
- GenBank, FASTA, Sequence Viewer (Graphics)
mRNA and Protein(s)
-
XM_036157257.1 → XP_036013150.1 proteasome subunit alpha type-3 isoform X2
- UniProtKB/TrEMBL
-
Q9DCD8
- Conserved Domains (1) summary
-
- cd03751
Location:5 → 195
- proteasome_alpha_type_3; The 20S proteasome, multisubunit proteolytic complex, is the central enzyme of nonlysosomal protein degradation in both the cytosol and nucleus. It is composed of 28 subunits arranged as four homoheptameric rings that stack on top of one another forming ...