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    Krtap5-1 keratin associated protein 5-1 [ Mus musculus (house mouse) ]

    Gene ID: 50774, updated on 9-Dec-2024

    Summary

    Official Symbol
    Krtap5-1provided by MGI
    Official Full Name
    keratin associated protein 5-1provided by MGI
    Primary source
    MGI:MGI:1354732
    See related
    Ensembl:ENSMUSG00000066100 AllianceGenome:MGI:1354732
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Summary
    Predicted to enable identical protein binding activity. Predicted to be located in intermediate filament. Orthologous to several human genes including KRTAP5-10 (keratin associated protein 5-10); KRTAP5-11 (keratin associated protein 5-11); and KRTAP5-2 (keratin associated protein 5-2). [provided by Alliance of Genome Resources, Dec 2024]
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    Genomic context

    See Krtap5-1 in Genome Data Viewer
    Location:
    7 F5; 7 87.86 cM
    Exon count:
    1
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 7 NC_000073.7 (141850114..141850871, complement)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 7 NC_000073.6 (142296377..142297134, complement)

    Chromosome 7 - NC_000073.7Genomic Context describing neighboring genes Neighboring gene predicted gene 10013 Neighboring gene predicted gene 45889 Neighboring gene keratin associated protein 5-4 Neighboring gene predicted gene 5054

    Genomic regions, transcripts, and products

    Variation

    Alleles

    Alleles of this type are documented at Mouse Genome Informatics  (MGI)
    • Endonuclease-mediated (1) 

    General gene information

    Markers

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables identical protein binding ISO
    Inferred from Sequence Orthology
    more info
     
    enables molecular_function ND
    No biological Data available
    more info
     
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
     
    Component Evidence Code Pubs
    is_active_in cellular_component ND
    No biological Data available
    more info
     
    located_in intermediate filament IEA
    Inferred from Electronic Annotation
    more info
     

    General protein information

    Preferred Names
    keratin-associated protein 5-1
    Names
    UHS-Ser-1
    ultra high sulfur serine protein 1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_015808.2NP_056623.1  keratin-associated protein 5-1

      See identical proteins and their annotated locations for NP_056623.1

      Status: VALIDATED

      Source sequence(s)
      AC034099
      Consensus CDS
      CCDS80834.1
      UniProtKB/Swiss-Prot
      A4IF43, Q64507
      Related
      ENSMUSP00000139752.2, ENSMUST00000188274.2

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000073.7 Reference GRCm39 C57BL/6J

      Range
      141850114..141850871 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)