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    Fndc8 fibronectin type III domain containing 8 [ Mus musculus (house mouse) ]

    Gene ID: 78919, updated on 9-Dec-2024

    Summary

    Official Symbol
    Fndc8provided by MGI
    Official Full Name
    fibronectin type III domain containing 8provided by MGI
    Primary source
    MGI:MGI:1926169
    See related
    Ensembl:ENSMUSG00000018844 AllianceGenome:MGI:1926169
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    4930466G16Rik
    Summary
    Orthologous to human FNDC8 (fibronectin type III domain containing 8). [provided by Alliance of Genome Resources, Dec 2024]
    Expression
    Biased expression in testis adult (RPKM 49.8) and frontal lobe adult (RPKM 1.0) See more
    Orthologs
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    Genomic context

    See Fndc8 in Genome Data Viewer
    Location:
    11 C; 11 50.3 cM
    Exon count:
    4
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 11 NC_000077.7 (82782971..82791563)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 11 NC_000077.6 (82892145..82900737)

    Chromosome 11 - NC_000077.7Genomic Context describing neighboring genes Neighboring gene ligase III, DNA, ATP-dependent Neighboring gene ring finger and FYVE like domain containing protein Neighboring gene STARR-seq mESC enhancer starr_30179 Neighboring gene RAD51 paralog D Neighboring gene STARR-positive B cell enhancer ABC_E8433 Neighboring gene notchless homolog 1 Neighboring gene unc-45 myosin chaperone B Neighboring gene unc-45 myosin chaperone B, opposite strand

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Variation

    Alleles

    Alleles of this type are documented at Mouse Genome Informatics  (MGI)
    • Endonuclease-mediated (1)  1 citation
    • Gene trapped (1) 

    General protein information

    Preferred Names
    fibronectin type III domain-containing protein 8

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_030224.1NP_084500.1  fibronectin type III domain-containing protein 8

      See identical proteins and their annotated locations for NP_084500.1

      Status: PROVISIONAL

      Source sequence(s)
      BC120835
      Consensus CDS
      CCDS25151.1
      UniProtKB/Swiss-Prot
      Q8BUG1, Q9D2H8
      UniProtKB/TrEMBL
      B2RQ03
      Related
      ENSMUSP00000018988.6, ENSMUST00000018988.6
      Conserved Domains (1) summary
      pfam00041
      Location:186266
      fn3; Fibronectin type III domain

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000077.7 Reference GRCm39 C57BL/6J

      Range
      82782971..82791563
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)