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These reference sequences exist independently of genome builds. Explain
These reference sequences are curated independently of the genome
annotation cycle, so their versions may not match the RefSeq versions in the current
genome build. Identify version mismatches by comparing the version of the RefSeq in
this section to the one reported in Genomic regions,
transcripts, and products above.
mRNA and Protein(s)
-
NM_001304562.2 → NP_001291491.1 INO80 complex subunit E isoform 2
See identical proteins and their annotated locations for NP_001291491.1
Status: VALIDATED
- Description
- Transcript Variant: This variant (2) lacks an alternate in-frame exon compared to variant 1. The resulting isoform (2) has the same N- and C-termini but is shorter compared to isoform 1.
- Source sequence(s)
-
AC093512, AL525020, BC047712, BI093312
- Consensus CDS
-
CCDS76853.1
- UniProtKB/TrEMBL
- H3BNM4, J3KNE2
- Related
- ENSP00000303977.7, ENST00000304516.11
- Conserved Domains (1) summary
-
- pfam08537
Location:12 → 65
- NBP1; Fungal Nap binding protein NBP1
-
NM_001304563.2 → NP_001291492.1 INO80 complex subunit E isoform 3
See identical proteins and their annotated locations for NP_001291492.1
Status: VALIDATED
- Description
- Transcript Variant: This variant (3) contains an alternate exon in the 3' end compared to variant 1. The resulting isoform (3) has a shorter and distinct C-terminus compared to isoform 1.
- Source sequence(s)
-
AC093512, AL525020, BC047712, BU528528
- UniProtKB/TrEMBL
-
I3NI13
-
NM_173618.3 → NP_775889.1 INO80 complex subunit E isoform 1
See identical proteins and their annotated locations for NP_775889.1
Status: VALIDATED
- Description
- Transcript Variant: This variant (1) encodes the longest isoform (1).
- Source sequence(s)
-
AC093512, AK075133, BC047712
- Consensus CDS
-
CCDS10665.1
- UniProtKB/Swiss-Prot
- Q6Y2K3, Q8NBZ0
- UniProtKB/TrEMBL
-
H3BNM4
- Related
- ENSP00000457016.1, ENST00000563197.6
RNA
-
NR_130786.2 RNA Sequence
Status: VALIDATED
- Description
- Transcript Variant: This variant (4) uses an alternate splice junction at the 5' end of an internal exon and contains an alternate exon in the 3' end compared to variant 1. This variant is represented as non-coding because the use of the 5'-most expected translational start codon renders the transcript a candidate for nonsense-mediated mRNA decay (NMD).
- Source sequence(s)
-
AC093512, AL525020, BC047712, BM924992, BX356644
-
NR_130787.2 RNA Sequence
Status: VALIDATED
- Description
- Transcript Variant: This variant (5) uses an alternate splice junction at the 5' end of an internal exon compared to variant 1. This variant is represented as non-coding because the use of the 5'-most expected translational start codon renders the transcript a candidate for nonsense-mediated mRNA decay (NMD).
- Source sequence(s)
-
AC093512, AL525020, BC047712, BM924992
-
NR_134855.2 RNA Sequence
Status: VALIDATED
- Description
- Transcript Variant: This variant (6) contains four alternate internal exons, compared to variant 1. This variant is represented as non-coding because the use of the 5'-most expected translational start codon renders the transcript a candidate for nonsense-mediated mRNA decay (NMD).
- Source sequence(s)
-
AL525020, BC035693
- Related
-
ENST00000567987.5