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    LINC01019 long intergenic non-protein coding RNA 1019 [ Homo sapiens (human) ]

    Gene ID: 285577, updated on 10-Dec-2024

    Summary

    Official Symbol
    LINC01019provided by HGNC
    Official Full Name
    long intergenic non-protein coding RNA 1019provided by HGNC
    Primary source
    HGNC:HGNC:27742
    See related
    Ensembl:ENSG00000248118 AllianceGenome:HGNC:27742
    Gene type
    ncRNA
    RefSeq status
    VALIDATED
    Organism
    Homo sapiens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
    Also known as
    LINC01017
    Expression
    Low expression observed in reference dataset See more
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    Genomic context

    See LINC01019 in Genome Data Viewer
    Location:
    5p15.33
    Exon count:
    5
    Annotation release Status Assembly Chr Location
    RS_2024_08 current GRCh38.p14 (GCF_000001405.40) 5 NC_000005.10 (3417152..3536094, complement)
    RS_2024_08 current T2T-CHM13v2.0 (GCF_009914755.1) 5 NC_060929.1 (3336499..3454793, complement)
    RS_2024_09 previous assembly GRCh37.p13 (GCF_000001405.25) 5 NC_000005.9 (3417266..3536208, complement)

    Chromosome 5 - NC_000005.10Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC105374621 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr5:3079616-3080276 Neighboring gene NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr5:3100471-3101344 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr5:3099596-3100470 Neighboring gene NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr5:3101345-3102218 Neighboring gene NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr5:3103093-3103967 Neighboring gene ReSE screen-validated silencer GRCh37_chr5:3127153-3127350 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr5:3133320-3133820 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr5:3133821-3134321 Neighboring gene BRD4-independent group 4 enhancer GRCh37_chr5:3176917-3178116 Neighboring gene VISTA enhancer hs603 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr5:3185307-3185822 Neighboring gene VISTA enhancer hs533 Neighboring gene ReSE screen-validated silencer GRCh37_chr5:3191198-3191363 Neighboring gene VISTA enhancer hs754 Neighboring gene long intergenic non-protein coding RNA 1377 Neighboring gene NANOG hESC enhancer GRCh37_chr5:3251839-3252659 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr5:3266942-3267940 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr5:3301153-3301654 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr5:3301655-3302154 Neighboring gene MED14-independent group 3 enhancer GRCh37_chr5:3310881-3312080 Neighboring gene ReSE screen-validated silencer GRCh37_chr5:3325507-3325688 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr5:3346175-3346676 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr5:3346677-3347176 Neighboring gene long intergenic non-protein coding RNA 2162 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr5:3490824-3491324 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr5:3511427-3511928 Neighboring gene VISTA enhancer hs261 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr5:3510857-3511356 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr5:3518997-3519497 Neighboring gene long intergenic non-protein coding RNA 1017 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr5:3520242-3520742 Neighboring gene Sharpr-MPRA regulatory region 3294 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr5:3598809-3599471 Neighboring gene H3K27ac-H3K4me1 hESC enhancer GRCh37_chr5:3599472-3600133 Neighboring gene H3K4me1 hESC enhancer GRCh37_chr5:3600797-3601457 Neighboring gene uncharacterized LOC107986399 Neighboring gene iroquois homeobox 1

    Genomic regions, transcripts, and products

    General gene information

    Markers

    Other Names

    • long intergenic non-protein coding RNA 1017

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    RNA

    1. NR_033898.1 RNA Sequence

      Status: VALIDATED

      Source sequence(s)
      AC016595, AC026743, BC035019, DB097708
      Related
      ENST00000505443.1

    RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCh38.p14 Primary Assembly

    Genomic

    1. NC_000005.10 Reference GRCh38.p14 Primary Assembly

      Range
      3417152..3536094 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Alternate T2T-CHM13v2.0

    Genomic

    1. NC_060929.1 Alternate T2T-CHM13v2.0

      Range
      3336499..3454793 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)