U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    Tex22 testis expressed gene 22 [ Mus musculus (house mouse) ]

    Gene ID: 75671, updated on 27-Nov-2024

    Summary

    Official Symbol
    Tex22provided by MGI
    Official Full Name
    testis expressed gene 22provided by MGI
    Primary source
    MGI:MGI:1922921
    See related
    Ensembl:ENSMUSG00000012211 AllianceGenome:MGI:1922921
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Mus musculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
    Also known as
    Tep22; 1700028O09Rik
    Summary
    Located in acrosomal vesicle. Orthologous to human TEX22 (testis expressed 22). [provided by Alliance of Genome Resources, Nov 2024]
    Expression
    Restricted expression toward testis adult (RPKM 119.4) See more
    Orthologs
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    See Tex22 in Genome Data Viewer
    Location:
    12 F1; 12 61.57 cM
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCm39 (GCF_000001635.27) 12 NC_000078.7 (113038122..113052537)
    108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 12 NC_000078.6 (113074463..113088917)

    Chromosome 12 - NC_000078.7Genomic Context describing neighboring genes Neighboring gene RIKEN cDNA 9230104M06 gene Neighboring gene STARR-positive B cell enhancer ABC_E1866 Neighboring gene phosphofurin acidic cluster sorting protein 2 Neighboring gene CapStarr-seq enhancer MGSCv37_chr12:114285178-114285287 Neighboring gene CapStarr-seq enhancer MGSCv37_chr12:114285299-114285486 Neighboring gene metastasis associated 1 Neighboring gene RIKEN cDNA F930026P19 gene

    Genomic regions, transcripts, and products

    Expression

    • Project title: Mouse ENCODE transcriptome data
    • Description: RNA profiling data sets generated by the Mouse ENCODE project.
    • BioProject: PRJNA66167
    • Publication: PMID 25409824
    • Analysis date: n/a

    Variation

    Alleles

    Alleles of this type are documented at Mouse Genome Informatics  (MGI)
    • Endonuclease-mediated (1) 
    • Targeted (2)  1 citation

    General gene information

    Markers

    Gene Ontology Provided by MGI

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
     
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
     
    Component Evidence Code Pubs
    located_in acrosomal vesicle IDA
    Inferred from Direct Assay
    more info
    PubMed 
    located_in cytoplasm IDA
    Inferred from Direct Assay
    more info
    PubMed 

    General protein information

    Preferred Names
    testis-expressed protein 22
    Names
    testis-expressed protein of 22 kDa
    testis-expressed sequence 22 protein

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001361919.1NP_001348848.1  testis-expressed protein 22

      Status: VALIDATED

      Source sequence(s)
      AC073562, AK006471, BX631150
      Consensus CDS
      CCDS26203.1
      UniProtKB/Swiss-Prot
      Q80ZP5, Q9D9U4
      Related
      ENSMUSP00000105351.3, ENSMUST00000109729.3
    2. NM_001361920.1NP_001348849.1  testis-expressed protein 22

      Status: VALIDATED

      Source sequence(s)
      AC073562, AK006471, BU582893, BX631150
      Consensus CDS
      CCDS26203.1
      UniProtKB/Swiss-Prot
      Q80ZP5, Q9D9U4
      Related
      ENSMUSP00000116272.2, ENSMUST00000146107.8
    3. NM_029381.2NP_083657.1  testis-expressed protein 22

      See identical proteins and their annotated locations for NP_083657.1

      Status: VALIDATED

      Source sequence(s)
      AC073562
      Consensus CDS
      CCDS26203.1
      UniProtKB/Swiss-Prot
      Q80ZP5, Q9D9U4
      Related
      ENSMUSP00000012355.8, ENSMUST00000012355.14

    RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCm39 C57BL/6J

    Genomic

    1. NC_000078.7 Reference GRCm39 C57BL/6J

      Range
      113038122..113052537
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)