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    Dhrs13 dehydrogenase/reductase 13 [ Rattus norvegicus (Norway rat) ]

    Gene ID: 303275, updated on 27-Nov-2024

    Summary

    Official Symbol
    Dhrs13provided by RGD
    Official Full Name
    dehydrogenase/reductase 13provided by RGD
    Primary source
    RGD:1305508
    See related
    EnsemblRapid:ENSRNOG00000072884 AllianceGenome:RGD:1305508
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Rattus norvegicus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
    Also known as
    RGD1305508
    Summary
    Orthologous to human DHRS13 (dehydrogenase/reductase 13). [provided by Alliance of Genome Resources, Nov 2024]
    Expression
    Biased expression in Thymus (RPKM 47.8), Adrenal (RPKM 43.0) and 9 other tissues See more
    Orthologs
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    Genomic context

    See Dhrs13 in Genome Data Viewer
    Location:
    10q25
    Exon count:
    5
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCr8 (GCF_036323735.1) 10 NC_086028.1 (63418790..63424005)
    RS_2023_06 previous assembly mRatBN7.2 (GCF_015227675.2) 10 NC_051345.1 (62920791..62925952)
    106 previous assembly Rnor_6.0 (GCF_000001895.5) 10 NC_005109.4 (65329407..65334533, complement)

    Chromosome 10 - NC_086028.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC134480828 Neighboring gene seizure related 6 homolog Neighboring gene PHD finger protein 12 Neighboring gene flotillin 2 Neighboring gene microRNA 144

    Genomic regions, transcripts, and products

    Expression

    • Project title: A rat RNA-Seq transcriptomic BodyMap across 11 organs and 4 developmental stages
    • Description: 320 RNA samples isolated from 11 organs (adrenal gland, brain, heart, kidney, liver, lung, muscle, spleen, thymus, and testes or uterus) from both sexes of Fischer 344 rats across four developmental stages (2-, 6-, 21-, and 104-weeks-old)
    • BioProject: PRJNA238328
    • Publication: PMID 24510058
    • Analysis date: Mon Jun 6 17:44:12 2016

    General protein information

    Preferred Names
    dehydrogenase/reductase SDR family member 13
    Names
    dehydrogenase/reductase (SDR family) member 13

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001398768.1NP_001385697.1  dehydrogenase/reductase SDR family member 13

      Status: VALIDATED

      Source sequence(s)
      JAXUCZ010000010
      Related
      ENSRNOP00000099808.1, ENSRNOT00000161783.1
      Conserved Domains (1) summary
      cd05327
      Location:36304
      retinol-DH_like_SDR_c_like; retinol dehydrogenase (retinol-DH), Light dependent Protochlorophyllide (Pchlide) OxidoReductase (LPOR) and related proteins, classical (c) SDRs

    RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCr8

    Genomic

    1. NC_086028.1 Reference GRCr8

      Range
      63418790..63424005
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_063269043.1XP_063125113.1  dehydrogenase/reductase SDR family member 13 isoform X1