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    Smim29 small integral membrane protein 29 [ Rattus norvegicus (Norway rat) ]

    Gene ID: 294291, updated on 9-Dec-2024

    Summary

    Official Symbol
    Smim29provided by RGD
    Official Full Name
    small integral membrane protein 29provided by RGD
    Primary source
    RGD:1564450
    See related
    AllianceGenome:RGD:1564450
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Rattus norvegicus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus
    Also known as
    RGD1564450
    Summary
    Orthologous to human SMIM29 (small integral membrane protein 29). [provided by Alliance of Genome Resources, Dec 2024]
    Expression
    Biased expression in Thymus (RPKM 229.1), Spleen (RPKM 139.9) and 9 other tissues See more
    Orthologs
    NEW
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    Genomic context

    See Smim29 in Genome Data Viewer
    Location:
    20p12
    Exon count:
    5
    Annotation release Status Assembly Chr Location
    RS_2024_02 current GRCr8 (GCF_036323735.1) 20 NC_086038.1 (5620686..5622730, complement)
    RS_2023_06 previous assembly mRatBN7.2 (GCF_015227675.2) 20 NC_051355.1 (5618845..5620856, complement)
    106 previous assembly Rnor_6.0 (GCF_000001895.5) 20 NC_005119.4 (7140241..7142316, complement)

    Chromosome 20 - NC_086038.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC120098859 Neighboring gene high mobility group AT-hook 1 Neighboring gene nudix hydrolase 3 Neighboring gene ribosomal protein S10

    Genomic regions, transcripts, and products

    General protein information

    Preferred Names
    small integral membrane protein 29
    Names
    uncharacterized protein C6orf1 homolog

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001395665.1NP_001382594.1  small integral membrane protein 29 isoform 2

      Status: VALIDATED

      Source sequence(s)
      JAXUCZ010000020
    2. NM_001395666.1NP_001382595.1  small integral membrane protein 29 isoform 3

      Status: VALIDATED

      Source sequence(s)
      JAXUCZ010000020
    3. NM_001429772.1NP_001416701.1  small integral membrane protein 29 isoform 2

      Status: VALIDATED

      Source sequence(s)
      JAXUCZ010000020
    4. NM_001429773.1NP_001416702.1  small integral membrane protein 29 isoform 2

      Status: VALIDATED

      Source sequence(s)
      JAXUCZ010000020
    5. NM_001429774.1NP_001416703.1  small integral membrane protein 29 isoform 2

      Status: VALIDATED

      Source sequence(s)
      JAXUCZ010000020
    6. NM_001429775.1NP_001416704.1  small integral membrane protein 29 isoform 2

      Status: VALIDATED

      Source sequence(s)
      JAXUCZ010000020
    7. NM_001429776.1NP_001416705.1  small integral membrane protein 29 isoform 4

      Status: VALIDATED

      Source sequence(s)
      JAXUCZ010000020

    RefSeqs of Annotated Genomes: GCF_036323735.1-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCr8

    Genomic

    1. NC_086038.1 Reference GRCr8

      Range
      5620686..5622730 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_063279029.1XP_063135099.1  small integral membrane protein 29 isoform X3

    2. XM_017601591.2XP_017457080.1  small integral membrane protein 29 isoform X2

    3. XM_063279028.1XP_063135098.1  small integral membrane protein 29 isoform X1

      UniProtKB/TrEMBL
      A0A0G2K1X2, A6JJM6

    Suppressed Reference Sequence(s)

    The following Reference Sequences have been suppressed. Explain

    1. NM_001106377.1: Suppressed sequence

      Description
      NM_001106377.1: This RefSeq was removed because currently there is support for the transcript but not for the protein.