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    TASOR transcription activation suppressor [ Bos taurus (domestic cattle) ]

    Gene ID: 510095, updated on 27-Dec-2024

    Summary

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    Official Symbol
    TASORprovided by VGNC
    Official Full Name
    transcription activation suppressorprovided by VGNC
    Primary source
    VGNC:VGNC:28783
    See related
    Ensembl:ENSBTAG00000019748
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Bos taurus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
    Also known as
    FAM208A; C22H3orf63
    Orthologs
    human mouse all
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    Genomic context

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    See TASOR in Genome Data Viewer
    Location:
    chromosome: 22
    Exon count:
    25
    Annotation release Status Assembly Chr Location
    RS_2024_12 current ARS-UCD2.0 (GCF_002263795.3) 22 NC_037349.1 (44352958..44404519)

    Chromosome 22 - NC_037349.1Genomic Context describing neighboring genes Neighboring gene interleukin 17 receptor D Neighboring gene Rho guanine nucleotide exchange factor 3 Neighboring gene uncharacterized LOC112443464 Neighboring gene serine/arginine repetitive matrix protein 3-like Neighboring gene coiled-coil domain containing 66 Neighboring gene microRNA mir-2371 Neighboring gene ELKS/RAB6-interacting/CAST family member 2

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_037349.1 Chromosome 22 Reference ARS-UCD2.0 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Expression

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    • Project title: Dominette sequence data
    • BioProject: PRJNA294306
    • Analysis date: Tue Dec 17 08:57:05 2024

    Bibliography

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    Related articles in PubMed

    1. A whole-genome assembly of the domestic cow, Bos taurus. Zimin AV, et al. Genome Biol, 2009. PMID 19393038, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables chromatin binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in negative regulation of gene expression, epigenetic IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in protein localization to heterochromatin IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of heterochromatin IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in nucleoplasm IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    protein TASOR
    Names
    family with sequence similarity 208 member A

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001205393.2 → NP_001192322.1  protein TASOR

      Status: VALIDATED

      Source sequence(s)
      NKLS02000022
      UniProtKB/TrEMBL
      F1N2G9
      Conserved Domains (1) summary
      pfam12509
      Location:155 → 316
      DUF3715; Protein of unknown function (DUF3715)

    RefSeqs of Annotated Genomes: GCF_002263795.3-RS_2024_12

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ARS-UCD2.0 Primary Assembly

    Genomic

    1. NC_037349.1 Reference ARS-UCD2.0 Primary Assembly

      Range
      44352958..44404519
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_005222766.5 → XP_005222823.2  protein TASOR isoform X3

      UniProtKB/TrEMBL
      F1N2G9
      Related
      ENSBTAP00000026317.7, ENSBTAT00000026317.7
      Conserved Domains (1) summary
      pfam12509
      Location:155 → 316
      DUF3715; Protein of unknown function (DUF3715)

    2. XM_010817696.4 → XP_010815998.1  protein TASOR isoform X1

      See identical proteins and their annotated locations for XP_010815998.1

      UniProtKB/TrEMBL
      A0AAA9S166
      Conserved Domains (1) summary
      pfam12509
      Location:163 → 316
      DUF3715; Protein of unknown function (DUF3715)

    3. XM_005222765.5 → XP_005222822.2  protein TASOR isoform X2

      UniProtKB/TrEMBL
      A0AAA9S166
      Related
      ENSBTAP00000077404.1, ENSBTAT00000132095.1
      Conserved Domains (1) summary
      pfam12509
      Location:155 → 316
      DUF3715; Protein of unknown function (DUF3715)

    4. XM_059879584.1 → XP_059735567.1  protein TASOR isoform X4

      UniProtKB/TrEMBL
      A0AAA9S166
    Nucleotide Protein Strain
    Heading Accession and Version

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