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    MYO1B myosin IB [ Bos taurus (domestic cattle) ]

    Gene ID: 537282, updated on 30-Jan-2025

    Summary

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    Official Symbol
    MYO1Bprovided by VGNC
    Official Full Name
    myosin IBprovided by VGNC
    Primary source
    VGNC:VGNC:31817
    See related
    BGD:BT22664; EnsemblRapid:ENSBTAG00070000525
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Bos taurus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
    Orthologs
    human mouse all
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    Genomic context

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    See MYO1B in Genome Data Viewer
    Location:
    chromosome: 2
    Exon count:
    35
    Annotation release Status Assembly Chr Location
    RS_2024_12 current ARS-UCD2.0 (GCF_002263795.3) 2 NC_037329.1 (79795579..79994786)

    Chromosome 2 - NC_037329.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC104971266 Neighboring gene signal transducer and activator of transcription 1 Neighboring gene signal transducer and activator of transcription 4 Neighboring gene uncharacterized LOC132343173 Neighboring gene nucleic acid binding protein 1 Neighboring gene caveolae associated protein 2

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_037329.1 Chromosome 2 Reference ARS-UCD2.0 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Expression

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    • Project title: Dominette sequence data
    • BioProject: PRJNA294306
    • Analysis date: Tue Dec 17 08:57:05 2024

    Bibliography

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    Related articles in PubMed

    1. A whole-genome assembly of the domestic cow, Bos taurus. Zimin AV, et al. Genome Biol, 2009. PMID 19393038, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Clone Names

    • MGC160128

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables ATP binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables actin filament binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables microfilament motor activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in actin filament organization IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in vesicle transport along actin filament IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in actin cytoskeleton IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in brush border IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in microvillus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    part_of myosin complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in plasma membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in vesicle IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    unconventional myosin-Ib

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001102199.1 → NP_001095669.1  unconventional myosin-Ib

      See identical proteins and their annotated locations for NP_001095669.1

      Status: PROVISIONAL

      Source sequence(s)
      BC147926
      UniProtKB/TrEMBL
      A0A3Q1MR81, A6QLD6
      Related
      ENSBTAP00070000815.1, ENSBTAT00070001219.1
      Conserved Domains (4) summary
      smart00015
      Location:749 → 771
      IQ; Calmodulin-binding motif
      smart00242
      Location:16 → 701
      MYSc; Myosin. Large ATPases
      cd01378
      Location:29 → 688
      MYSc_Myo1; class I myosin, motor domain
      pfam06017
      Location:941 → 1115
      Myosin_TH1; Unconventional myosin tail, actin- and lipid-binding

    RefSeqs of Annotated Genomes: GCF_002263795.3-RS_2024_12

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ARS-UCD2.0 Primary Assembly

    Genomic

    1. NC_037329.1 Reference ARS-UCD2.0 Primary Assembly

      Range
      79795579..79994786
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_024976322.2 → XP_024832090.1  unconventional myosin-Ib isoform X6

      UniProtKB/TrEMBL
      A0A3Q1MU95
      Related
      ENSBTAP00070000809.1, ENSBTAT00070001198.1
      Conserved Domains (3) summary
      smart00015
      Location:749 → 771
      IQ; Calmodulin-binding motif
      cd01378
      Location:29 → 688
      MYSc_Myo1; class I myosin, motor domain
      pfam06017
      Location:883 → 1058
      Myosin_TH1; Unconventional myosin tail, actin- and lipid-binding

    2. XM_059875676.1 → XP_059731659.1  unconventional myosin-Ib isoform X1

      UniProtKB/TrEMBL
      A0A3Q1MR81

    3. XM_059875680.1 → XP_059731663.1  unconventional myosin-Ib isoform X2

      UniProtKB/TrEMBL
      A0A3Q1LV94

    4. XM_059875687.1 → XP_059731670.1  unconventional myosin-Ib isoform X3

      UniProtKB/TrEMBL
      A0A3Q1MU95
      Related
      ENSBTAP00070000799.1, ENSBTAT00070001162.1

    5. XM_005202581.5 → XP_005202638.1  unconventional myosin-Ib isoform X4

      See identical proteins and their annotated locations for XP_005202638.1

      UniProtKB/TrEMBL
      A0A3Q1MR81, A6QLD6
      Related
      ENSBTAP00070000807.1, ENSBTAT00070001190.1
      Conserved Domains (4) summary
      smart00015
      Location:749 → 771
      IQ; Calmodulin-binding motif
      smart00242
      Location:16 → 701
      MYSc; Myosin. Large ATPases
      cd01378
      Location:29 → 688
      MYSc_Myo1; class I myosin, motor domain
      pfam06017
      Location:941 → 1115
      Myosin_TH1; Unconventional myosin tail, actin- and lipid-binding

    6. XM_059875690.1 → XP_059731673.1  unconventional myosin-Ib isoform X5

      UniProtKB/TrEMBL
      A0A3Q1MR81

    7. XM_059875698.1 → XP_059731681.1  unconventional myosin-Ib isoform X7

      UniProtKB/TrEMBL
      A0A3Q1MR81
    Nucleotide Protein Strain
    Heading Accession and Version

    Gene LinkOut

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