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    HDDC2 HD domain containing 2 [ Bos taurus (domestic cattle) ]

    Gene ID: 509282, updated on 30-Jan-2025

    Summary

    Official Symbol
    HDDC2provided by VGNC
    Official Full Name
    HD domain containing 2provided by VGNC
    Primary source
    VGNC:VGNC:29785
    See related
    BGD:BT20961; EnsemblRapid:ENSBTAG00070026791
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Bos taurus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
    Orthologs
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    Genomic context

    See HDDC2 in Genome Data Viewer
    Location:
    chromosome: 9
    Exon count:
    6
    Annotation release Status Assembly Chr Location
    RS_2024_12 current ARS-UCD2.0 (GCF_002263795.3) 9 NC_037336.1 (25960234..25979949)

    Chromosome 9 - NC_037336.1Genomic Context describing neighboring genes Neighboring gene transfer RNA cysteine (anticodon GCA) Neighboring gene uncharacterized LOC132346208 Neighboring gene microRNA mir-2477 Neighboring gene TPD52 like 1 Neighboring gene uncharacterized LOC112448125

    Genomic regions, transcripts, and products

    Genomic Sequence:
    NC_037336.1 Chromosome 9 Reference ARS-UCD2.0 Primary Assembly

    Expression

    • Project title: Dominette sequence data
    • BioProject: PRJNA294306
    • Analysis date: Tue Dec 17 08:57:05 2024

    General protein information

    Preferred Names
    5'-deoxynucleotidase HDDC2
    Names
    HD domain-containing protein 2
    NP_001068869.1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001075401.1NP_001068869.1  5'-deoxynucleotidase HDDC2

      See identical proteins and their annotated locations for NP_001068869.1

      Status: PROVISIONAL

      Source sequence(s)
      BC120449
      UniProtKB/Swiss-Prot
      Q0P565
      UniProtKB/TrEMBL
      A0AAF6YKS7
      Related
      ENSBTAP00070036134.1, ENSBTAT00070060742.1
      Conserved Domains (1) summary
      pfam13023
      Location:25181
      HD_3; HD domain

    RefSeqs of Annotated Genomes: GCF_002263795.3-RS_2024_12

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ARS-UCD2.0 Primary Assembly

    Genomic

    1. NC_037336.1 Reference ARS-UCD2.0 Primary Assembly

      Range
      25960234..25979949
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)