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    PPP1R11 protein phosphatase 1 regulatory inhibitor subunit 11 [ Bos taurus (domestic cattle) ]

    Gene ID: 504846, updated on 27-Dec-2024

    Summary

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    Official Symbol
    PPP1R11provided by VGNC
    Official Full Name
    protein phosphatase 1 regulatory inhibitor subunit 11provided by VGNC
    Primary source
    VGNC:VGNC:33222
    See related
    BGD:BT11416
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Bos taurus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
    Orthologs
    human mouse all
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    Genomic context

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    See PPP1R11 in Genome Data Viewer
    Location:
    chromosome: 23
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    RS_2024_12 current ARS-UCD2.0 (GCF_002263795.3) 23 NC_037350.1 (28909897..28913055, complement)

    Chromosome 23 - NC_037350.1Genomic Context describing neighboring genes Neighboring gene tripartite motif containing 31 Neighboring gene uncharacterized LOC104975670 Neighboring gene transfer RNA serine (anticodon CGA) Neighboring gene ring finger protein 39 Neighboring gene uncharacterized LOC132343633 Neighboring gene putative uncharacterized protein ZNRD1-AS1 Neighboring gene RNA polymerase I subunit H

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_037350.1 Chromosome 23 Reference ARS-UCD2.0 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Expression

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    • Project title: Dominette sequence data
    • BioProject: PRJNA294306
    • Analysis date: Tue Dec 17 08:57:05 2024

    Bibliography

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    Related articles in PubMed

    1. A whole-genome assembly of the domestic cow, Bos taurus. Zimin AV, et al. Genome Biol, 2009. PMID 19393038, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables protein phosphatase 1 binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables protein serine/threonine phosphatase inhibitor activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    E3 ubiquitin-protein ligase PPP1R11
    Names
    protein phosphatase 1 regulatory subunit 11
    NP_001093765.1
    XP_005223660.1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001100295.2 → NP_001093765.1  E3 ubiquitin-protein ligase PPP1R11

      See identical proteins and their annotated locations for NP_001093765.1

      Status: VALIDATED

      Source sequence(s)
      BC148037, DV892450, DV909177
      UniProtKB/TrEMBL
      A6QLP3
      Conserved Domains (1) summary
      pfam07491
      Location:29 → 71
      PPI_Ypi1; Protein phosphatase inhibitor

    RefSeqs of Annotated Genomes: GCF_002263795.3-RS_2024_12

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ARS-UCD2.0 Primary Assembly

    Genomic

    1. NC_037350.1 Reference ARS-UCD2.0 Primary Assembly

      Range
      28909897..28913055 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_005223603.2 → XP_005223660.1  E3 ubiquitin-protein ligase PPP1R11 isoform X1

      See identical proteins and their annotated locations for XP_005223660.1

      UniProtKB/TrEMBL
      F6RET5
      Conserved Domains (1) summary
      pfam07491
      Location:10 → 52
      PPI_Ypi1; Protein phosphatase inhibitor
    Nucleotide Protein Strain
    Heading Accession and Version

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