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    SRSF10 serine and arginine rich splicing factor 10 [ Bos taurus (domestic cattle) ]

    Gene ID: 768310, updated on 1-Jan-2025

    Summary

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    Official Symbol
    SRSF10provided by VGNC
    Official Full Name
    serine and arginine rich splicing factor 10provided by VGNC
    Primary source
    VGNC:VGNC:35298
    See related
    Ensembl:ENSBTAG00000008072
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Bos taurus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
    Also known as
    FUSIP1; SFRS13A
    Orthologs
    human mouse all
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    Genomic context

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    See SRSF10 in Genome Data Viewer
    Location:
    chromosome: 2
    Exon count:
    6
    Annotation release Status Assembly Chr Location
    RS_2024_12 current ARS-UCD2.0 (GCF_002263795.3) 2 NC_037329.1 (128924184..128937403)

    Chromosome 2 - NC_037329.1Genomic Context describing neighboring genes Neighboring gene myomesin 3 Neighboring gene U6 spliceosomal RNA Neighboring gene uncharacterized LOC132343454 Neighboring gene transfer RNA arginine (anticodon ACG) Neighboring gene proline rich nuclear receptor coactivator 2

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_037329.1 Chromosome 2 Reference ARS-UCD2.0 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Expression

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    • Project title: Dominette sequence data
    • BioProject: PRJNA294306
    • Analysis date: Tue Dec 17 08:57:05 2024

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Clone Names

    • MGC128430

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables RNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in mRNA splicing, via spliceosome IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in nuclear speck IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    serine/arginine-rich splicing factor 10
    Names
    FUS interacting protein (serine/arginine-rich) 1
    splicing factor, arginine/serine-rich 13A

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001078126.3 → NP_001071594.1  serine/arginine-rich splicing factor 10 isoform 4

      See identical proteins and their annotated locations for NP_001071594.1

      Status: VALIDATED

      Source sequence(s)
      NKLS02000002
      UniProtKB/TrEMBL
      Q3ZBU5
      Conserved Domains (1) summary
      cl17169
      Location:5 → 99
      RRM_SF; RNA recognition motif (RRM) superfamily

    2. NM_001430795.1 → NP_001417724.1  serine/arginine-rich splicing factor 10 isoform 1

      Status: VALIDATED

      Source sequence(s)
      NKLS02000002
      UniProtKB/TrEMBL
      A0AAA9U1B4

    3. NM_001430796.1 → NP_001417725.1  serine/arginine-rich splicing factor 10 isoform 2

      Status: VALIDATED

      Source sequence(s)
      NKLS02000002

    4. NM_001430797.1 → NP_001417726.1  serine/arginine-rich splicing factor 10 isoform 3

      Status: VALIDATED

      Source sequence(s)
      NKLS02000002
      UniProtKB/TrEMBL
      F6RRB6

    5. NM_001430798.1 → NP_001417727.1  serine/arginine-rich splicing factor 10 isoform 5

      Status: VALIDATED

      Source sequence(s)
      NKLS02000002

    6. NM_001430799.1 → NP_001417728.1  serine/arginine-rich splicing factor 10 isoform 6

      Status: VALIDATED

      Source sequence(s)
      NKLS02000002
      UniProtKB/TrEMBL
      A0AAA9T808

    RefSeqs of Annotated Genomes: GCF_002263795.3-RS_2024_12

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ARS-UCD2.0 Primary Assembly

    Genomic

    1. NC_037329.1 Reference ARS-UCD2.0 Primary Assembly

      Range
      128924184..128937403
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_059877099.1 → XP_059733082.1  serine/arginine-rich splicing factor 10 isoform X7

    2. XM_005203275.5 → XP_005203332.1  serine/arginine-rich splicing factor 10 isoform X5

      See identical proteins and their annotated locations for XP_005203332.1

      Conserved Domains (1) summary
      cl17169
      Location:5 → 99
      RRM_SF; RNA recognition motif (RRM) superfamily
    Nucleotide Protein Strain
    Heading Accession and Version

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