U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    YPEL5 yippee like 5 [ Bos taurus (domestic cattle) ]

    Gene ID: 780856, updated on 30-Jan-2025

    Summary

    Go to the top of the page Help
    Official Symbol
    YPEL5provided by VGNC
    Official Full Name
    yippee like 5provided by VGNC
    Primary source
    VGNC:VGNC:37037
    See related
    BGD:BT24264; EnsemblRapid:ENSBTAG00070028067
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Bos taurus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
    Orthologs
    human mouse all
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See YPEL5 in Genome Data Viewer
    Location:
    chromosome: 11
    Exon count:
    4
    Annotation release Status Assembly Chr Location
    RS_2024_12 current ARS-UCD2.0 (GCF_002263795.3) 11 NC_037338.1 (69712711..69727353, complement)

    Chromosome 11 - NC_037338.1Genomic Context describing neighboring genes Neighboring gene lysocardiolipin acyltransferase 1 Neighboring gene uncharacterized LOC132346602 Neighboring gene LBH regulator of WNT signaling pathway Neighboring gene uncharacterized LOC132346519 Neighboring gene ALK receptor tyrosine kinase

    Genomic regions, transcripts, and products

    Go to the top of the page Help
    Genomic Sequence:
    NC_037338.1 Chromosome 11 Reference ARS-UCD2.0 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Expression

    Go to the top of the page Help
    • Project title: Dominette sequence data
    • BioProject: PRJNA294306
    • Analysis date: Tue Dec 17 08:57:05 2024

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. A whole-genome assembly of the domestic cow, Bos taurus. Zimin AV, et al. Genome Biol, 2009. PMID 19393038, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help

    Markers

    Homology

    Clone Names

    • MGC127468

    Gene Ontology Provided by RefSeq

    Component Evidence Code Pubs
    part_of ubiquitin ligase complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

    Go to the top of the page Help
    Preferred Names
    protein yippee-like 5
    NP_001073261.1
    XP_005212943.1
    XP_059747546.1

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001079793.2 → NP_001073261.1  protein yippee-like 5

      See identical proteins and their annotated locations for NP_001073261.1

      Status: PROVISIONAL

      Source sequence(s)
      BC103392
      UniProtKB/Swiss-Prot
      Q3ZBE7
      UniProtKB/TrEMBL
      A0AAA9RXZ1
      Related
      ENSBTAP00070038371.1, ENSBTAT00070063914.1
      Conserved Domains (1) summary
      cl13152
      Location:15 → 107
      RLR_C_like; C-terminal domain of Retinoic acid-inducible gene (RIG)-I-like Receptors, Cereblon (CRBN), and similar protein domains

    RefSeqs of Annotated Genomes: GCF_002263795.3-RS_2024_12

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ARS-UCD2.0 Primary Assembly

    Genomic

    1. NC_037338.1 Reference ARS-UCD2.0 Primary Assembly

      Range
      69712711..69727353 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_059891563.1 → XP_059747546.1  protein yippee-like 5 isoform X1

      UniProtKB/Swiss-Prot
      Q3ZBE7
      UniProtKB/TrEMBL
      A0AAA9RXZ1

    2. XM_005212886.5 → XP_005212943.1  protein yippee-like 5 isoform X1

      See identical proteins and their annotated locations for XP_005212943.1

      UniProtKB/Swiss-Prot
      Q3ZBE7
      UniProtKB/TrEMBL
      A0AAA9RXZ1
      Conserved Domains (1) summary
      cl13152
      Location:15 → 107
      RLR_C_like; C-terminal domain of Retinoic acid-inducible gene (RIG)-I-like Receptors, Cereblon (CRBN), and similar protein domains
    Nucleotide Protein Strain
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q3ZBE7.1 GenPept UniProtKB/Swiss-Prot:Q3ZBE7

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.