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    PRPF31 pre-mRNA processing factor 31 [ Bos taurus (domestic cattle) ]

    Gene ID: 513577, updated on 30-Jan-2025

    Summary

    Official Symbol
    PRPF31provided by VGNC
    Official Full Name
    pre-mRNA processing factor 31provided by VGNC
    Primary source
    VGNC:VGNC:33374
    See related
    BGD:BT30164; EnsemblRapid:ENSBTAG00070004411
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Bos taurus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
    Orthologs
    NEW
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    Genomic context

    See PRPF31 in Genome Data Viewer
    Location:
    chromosome: 18
    Exon count:
    14
    Annotation release Status Assembly Chr Location
    RS_2024_12 current ARS-UCD2.0 (GCF_002263795.3) 18 NC_037345.1 (63260500..63271920, complement)

    Chromosome 18 - NC_037345.1Genomic Context describing neighboring genes Neighboring gene leukocyte receptor cluster member 1 Neighboring gene CCR4-NOT transcription complex subunit 3 Neighboring gene uncharacterized LOC101905303 Neighboring gene TCF3 fusion partner Neighboring gene NADH:ubiquinone oxidoreductase subunit A3 Neighboring gene osteoclast associated Ig-like receptor

    Genomic regions, transcripts, and products

    Genomic Sequence:
    NC_037345.1 Chromosome 18 Reference ARS-UCD2.0 Primary Assembly

    Expression

    • Project title: Dominette sequence data
    • BioProject: PRJNA294306
    • Analysis date: Tue Dec 17 08:57:05 2024

    General gene information

    Markers

    Gene Ontology Provided by RefSeq

    Process Evidence Code Pubs
    involved_in mRNA splicing, via spliceosome IEA
    Inferred from Electronic Annotation
    more info
    PubMed 
    involved_in spliceosomal tri-snRNP complex assembly IEA
    Inferred from Electronic Annotation
    more info
    PubMed 
    Component Evidence Code Pubs
    part_of U4 snRNP IEA
    Inferred from Electronic Annotation
    more info
    PubMed 
    part_of U4/U6 x U5 tri-snRNP complex IEA
    Inferred from Electronic Annotation
    more info
    PubMed 
    part_of precatalytic spliceosome IEA
    Inferred from Electronic Annotation
    more info
    PubMed 

    General protein information

    Preferred Names
    U4/U6 small nuclear ribonucleoprotein Prp31
    Names
    PRP31 pre-mRNA processing factor 31 homolog

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001206285.2NP_001193214.1  U4/U6 small nuclear ribonucleoprotein Prp31

      See identical proteins and their annotated locations for NP_001193214.1

      Status: PROVISIONAL

      Source sequence(s)
      NKLS02000018
      UniProtKB/TrEMBL
      A0AAA9TPL7
      Related
      ENSBTAP00070005775.1, ENSBTAT00070010039.1
      Conserved Domains (2) summary
      pfam01798
      Location:100330
      Nop; snoRNA binding domain, fibrillarin
      pfam09785
      Location:337465
      Prp31_C; Prp31 C terminal domain

    RefSeqs of Annotated Genomes: GCF_002263795.3-RS_2024_12

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ARS-UCD2.0 Primary Assembly

    Genomic

    1. NC_037345.1 Reference ARS-UCD2.0 Primary Assembly

      Range
      63260500..63271920 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)