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    SLC27A4 solute carrier family 27 member 4 [ Bos taurus (domestic cattle) ]

    Gene ID: 514427, updated on 30-Jan-2025

    Summary

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    Official Symbol
    SLC27A4provided by VGNC
    Official Full Name
    solute carrier family 27 member 4provided by VGNC
    Primary source
    VGNC:VGNC:34788
    See related
    BGD:BT10951; EnsemblRapid:ENSBTAG00070019055
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Bos taurus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
    Orthologs
    human mouse all
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    Genomic context

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    See SLC27A4 in Genome Data Viewer
    Location:
    chromosome: 11
    Exon count:
    14
    Annotation release Status Assembly Chr Location
    RS_2024_12 current ARS-UCD2.0 (GCF_002263795.3) 11 NC_037338.1 (98945593..98959917)

    Chromosome 11 - NC_037338.1Genomic Context describing neighboring genes Neighboring gene transfer RNA tryptophan (anticodon CCA) Neighboring gene transfer RNA arginine (anticodon UCU) Neighboring gene uncharacterized LOC132346637 Neighboring gene ubiquitin related modifier 1 Neighboring gene microRNA mir-219-1 Neighboring gene microRNA mir-219b

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_037338.1 Chromosome 11 Reference ARS-UCD2.0 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Expression

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    • Project title: Dominette sequence data
    • BioProject: PRJNA294306
    • Analysis date: Tue Dec 17 08:57:05 2024

    Bibliography

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    Related articles in PubMed

    1. A whole-genome assembly of the domestic cow, Bos taurus. Zimin AV, et al. Genome Biol, 2009. PMID 19393038, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Clone Names

    • MGC140535

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables long-chain fatty acid transmembrane transporter activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables long-chain fatty acid-CoA ligase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in long-chain fatty acid import into cell IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in medium-chain fatty acid transport IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in response to nutrient IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in very long-chain fatty acid catabolic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in endoplasmic reticulum membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in microvillus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in plasma membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    long-chain fatty acid transport protein 4
    NP_001069135.1
    XP_024854337.1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001075667.1 → NP_001069135.1  long-chain fatty acid transport protein 4

      See identical proteins and their annotated locations for NP_001069135.1

      Status: PROVISIONAL

      Source sequence(s)
      BC120057
      UniProtKB/TrEMBL
      Q0VCQ2
      Related
      ENSBTAP00070025756.1, ENSBTAT00070043022.1
      Conserved Domains (1) summary
      cd05939
      Location:99 → 608
      hsFATP4_like; Fatty acid transport proteins (FATP), including FATP4 and FATP1, and similar proteins

    RefSeqs of Annotated Genomes: GCF_002263795.3-RS_2024_12

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ARS-UCD2.0 Primary Assembly

    Genomic

    1. NC_037338.1 Reference ARS-UCD2.0 Primary Assembly

      Range
      98945593..98959917
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_024998569.2 → XP_024854337.1  long-chain fatty acid transport protein 4 isoform X1

      UniProtKB/TrEMBL
      Q0VCQ2
      Conserved Domains (1) summary
      cd05939
      Location:99 → 608
      hsFATP4_like; Fatty acid transport proteins (FATP), including FATP4 and FATP1, and similar proteins
    Nucleotide Protein Strain
    Heading Accession and Version

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