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    FKBP9 FKBP prolyl isomerase 9 [ Bos taurus (domestic cattle) ]

    Gene ID: 534182, updated on 30-Jan-2025

    Summary

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    Official Symbol
    FKBP9provided by VGNC
    Official Full Name
    FKBP prolyl isomerase 9provided by VGNC
    Primary source
    VGNC:VGNC:29027
    See related
    BGD:BT14188; EnsemblRapid:ENSBTAG00070028891
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Bos taurus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
    Also known as
    FKBP-9
    Orthologs
    human mouse all
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    Genomic context

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    See FKBP9 in Genome Data Viewer
    Location:
    chromosome: 4
    Exon count:
    10
    Annotation release Status Assembly Chr Location
    RS_2024_12 current ARS-UCD2.0 (GCF_002263795.3) 4 NC_037331.1 (63812248..63854573, complement)

    Chromosome 4 - NC_037331.1Genomic Context describing neighboring genes Neighboring gene Bardet-Biedl syndrome 9 Neighboring gene RP9 pre-mRNA splicing factor Neighboring gene 5'-nucleotidase, cytosolic IIIA Neighboring gene uncharacterized LOC132345104 Neighboring gene kelch repeat and BTB domain containing 2

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_037331.1 Chromosome 4 Reference ARS-UCD2.0 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Expression

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    • Project title: Dominette sequence data
    • BioProject: PRJNA294306
    • Analysis date: Tue Dec 17 08:57:05 2024

    Bibliography

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    Related articles in PubMed

    1. Sequence evaluation of four pooled-tissue normalized bovine cDNA libraries and construction of a gene index for cattle. Smith TP, et al. Genome Res, 2001 Apr. PMID 11282978, Free PMC Article
    2. Characterization of 954 bovine full-CDS cDNA sequences. Harhay GP, et al. BMC Genomics, 2005 Nov 23. PMID 16305752, Free PMC Article
    3. A whole-genome assembly of the domestic cow, Bos taurus. Zimin AV, et al. Genome Biol, 2009. PMID 19393038, Free PMC Article
    4. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    5. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Clone Names

    • MGC128053

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables calcium ion binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables peptidyl-prolyl cis-trans isomerase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in endoplasmic reticulum IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    peptidyl-prolyl cis-trans isomerase FKBP9
    Names
    FK506 binding protein 9, 63 kDa
    FK506-binding protein 9
    PPIase FKBP9
    rotamase
    NP_001039837.1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001046372.2 → NP_001039837.1  peptidyl-prolyl cis-trans isomerase FKBP9 precursor

      See identical proteins and their annotated locations for NP_001039837.1

      Status: PROVISIONAL

      Source sequence(s)
      BC105407
      UniProtKB/Swiss-Prot
      Q2KJC8
      UniProtKB/TrEMBL
      A0AAA9RUL6
      Related
      ENSBTAP00070039801.1, ENSBTAT00070065723.1
      Conserved Domains (2) summary
      cd00051
      Location:501 → 562
      EFh; EF-hand, calcium binding motif; A diverse superfamily of calcium sensors and calcium signal modulators; most examples in this alignment model have 2 active canonical EF hands. Ca2+ binding induces a conformational change in the EF-hand motif, leading to ...
      pfam00254
      Location:51 → 142
      FKBP_C; FKBP-type peptidyl-prolyl cis-trans isomerase

    RefSeqs of Annotated Genomes: GCF_002263795.3-RS_2024_12

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ARS-UCD2.0 Primary Assembly

    Genomic

    1. NC_037331.1 Reference ARS-UCD2.0 Primary Assembly

      Range
      63812248..63854573 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
    Nucleotide Protein Strain
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q2KJC8.1 GenPept UniProtKB/Swiss-Prot:Q2KJC8

    Gene LinkOut

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