U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

Links from GEO Profiles

    • Showing Current items.

    ELMOD3 ELMO domain containing 3 [ Bos taurus (domestic cattle) ]

    Gene ID: 535421, updated on 30-Jan-2025

    Summary

    Go to the top of the page Help
    Official Symbol
    ELMOD3provided by VGNC
    Official Full Name
    ELMO domain containing 3provided by VGNC
    Primary source
    VGNC:VGNC:28443
    See related
    BGD:BT19455; EnsemblRapid:ENSBTAG00070014885
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Bos taurus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
    Also known as
    RBED1
    Orthologs
    human mouse all
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See ELMOD3 in Genome Data Viewer
    Location:
    chromosome: 11
    Exon count:
    16
    Annotation release Status Assembly Chr Location
    RS_2024_12 current ARS-UCD2.0 (GCF_002263795.3) 11 NC_037338.1 (49608572..49642031, complement)

    Chromosome 11 - NC_037338.1Genomic Context describing neighboring genes Neighboring gene SH2 domain containing 6 Neighboring gene capping actin protein, gelsolin like Neighboring gene transfer RNA glycine (anticodon CCC) Neighboring gene retinol saturase Neighboring gene trans-golgi network protein 2

    Genomic regions, transcripts, and products

    Go to the top of the page Help
    Genomic Sequence:
    NC_037338.1 Chromosome 11 Reference ARS-UCD2.0 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Expression

    Go to the top of the page Help
    • Project title: Dominette sequence data
    • BioProject: PRJNA294306
    • Analysis date: Tue Dec 17 08:57:05 2024

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. Sequence evaluation of four pooled-tissue normalized bovine cDNA libraries and construction of a gene index for cattle. Smith TP, et al. Genome Res, 2001 Apr. PMID 11282978, Free PMC Article
    2. Characterization of 954 bovine full-CDS cDNA sequences. Harhay GP, et al. BMC Genomics, 2005 Nov 23. PMID 16305752, Free PMC Article
    3. A whole-genome assembly of the domestic cow, Bos taurus. Zimin AV, et al. Genome Biol, 2009. PMID 19393038, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help

    Homology

    Clone Names

    • MGC166404

    General protein information

    Go to the top of the page Help
    Preferred Names
    ELMO domain-containing protein 3
    Names
    RNA binding motif and ELMO domain 1
    RNA binding motif and ELMO/CED-12 domain 1
    RNA-binding motif and ELMO domain-containing protein 1

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001015661.2 → NP_001015661.2  ELMO domain-containing protein 3

      See identical proteins and their annotated locations for NP_001015661.2

      Status: PROVISIONAL

      Source sequence(s)
      BC150099
      UniProtKB/Swiss-Prot
      Q0V8F5, Q58CP6, Q58DT5
      UniProtKB/TrEMBL
      A6QR36
      Related
      ENSBTAP00070019907.1, ENSBTAT00070033697.1
      Conserved Domains (1) summary
      pfam04727
      Location:159 → 308
      ELMO_CED12; ELMO/CED-12 family

    RefSeqs of Annotated Genomes: GCF_002263795.3-RS_2024_12

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ARS-UCD2.0 Primary Assembly

    Genomic

    1. NC_037338.1 Reference ARS-UCD2.0 Primary Assembly

      Range
      49608572..49642031 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_024998869.2 → XP_024854637.1  ELMO domain-containing protein 3 isoform X2

      UniProtKB/Swiss-Prot
      Q0V8F5, Q58CP6, Q58DT5
      UniProtKB/TrEMBL
      F1MFA6, G8JKZ4
      Conserved Domains (1) summary
      pfam04727
      Location:155 → 308
      ELMO_CED12; ELMO/CED-12 family

    2. XM_024998865.2 → XP_024854633.1  ELMO domain-containing protein 3 isoform X1

      UniProtKB/Swiss-Prot
      Q0V8F5, Q58CP6, Q58DT5
      Conserved Domains (1) summary
      pfam04727
      Location:202 → 355
      ELMO_CED12; ELMO/CED-12 family

    3. XM_024998867.2 → XP_024854635.1  ELMO domain-containing protein 3 isoform X2

      UniProtKB/Swiss-Prot
      Q0V8F5, Q58CP6, Q58DT5
      UniProtKB/TrEMBL
      F1MFA6, G8JKZ4
      Related
      ENSBTAP00070019915.1, ENSBTAT00070033709.1
      Conserved Domains (1) summary
      pfam04727
      Location:155 → 308
      ELMO_CED12; ELMO/CED-12 family

    4. XM_024998863.2 → XP_024854631.1  ELMO domain-containing protein 3 isoform X1

      UniProtKB/Swiss-Prot
      Q0V8F5, Q58CP6, Q58DT5
      Conserved Domains (1) summary
      pfam04727
      Location:202 → 355
      ELMO_CED12; ELMO/CED-12 family

    5. XM_024998868.2 → XP_024854636.1  ELMO domain-containing protein 3 isoform X2

      UniProtKB/Swiss-Prot
      Q0V8F5, Q58CP6, Q58DT5
      UniProtKB/TrEMBL
      F1MFA6, G8JKZ4
      Conserved Domains (1) summary
      pfam04727
      Location:155 → 308
      ELMO_CED12; ELMO/CED-12 family

    6. XM_024998864.2 → XP_024854632.1  ELMO domain-containing protein 3 isoform X1

      UniProtKB/Swiss-Prot
      Q0V8F5, Q58CP6, Q58DT5
      Conserved Domains (1) summary
      pfam04727
      Location:202 → 355
      ELMO_CED12; ELMO/CED-12 family

    7. XM_024998870.2 → XP_024854638.1  ELMO domain-containing protein 3 isoform X2

      UniProtKB/Swiss-Prot
      Q0V8F5, Q58CP6, Q58DT5
      UniProtKB/TrEMBL
      F1MFA6, G8JKZ4
      Conserved Domains (1) summary
      pfam04727
      Location:155 → 308
      ELMO_CED12; ELMO/CED-12 family

    8. XM_024998866.2 → XP_024854634.1  ELMO domain-containing protein 3 isoform X1

      UniProtKB/Swiss-Prot
      Q0V8F5, Q58CP6, Q58DT5
      Conserved Domains (1) summary
      pfam04727
      Location:202 → 355
      ELMO_CED12; ELMO/CED-12 family

    RNA

    1. XR_003037060.2 RNA Sequence

    Nucleotide Protein Strain
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q58DT5.1 GenPept UniProtKB/Swiss-Prot:Q58DT5

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.