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    LOC615809 retrotransposon Gag like 8C [ Bos taurus (domestic cattle) ]

    Gene ID: 615809, updated on 30-Jan-2025

    Summary

    Gene symbol
    LOC615809
    Gene description
    retrotransposon Gag like 8C
    See related
    BGD:BT13835; EnsemblRapid:ENSBTAG00070032918
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Bos taurus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
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    Genomic context

    See LOC615809 in Genome Data Viewer
    Location:
    chromosome: X
    Exon count:
    1
    Annotation release Status Assembly Chr Location
    RS_2024_12 current ARS-UCD2.0 (GCF_002263795.3) X NC_037357.1 (18782980..18784170)

    Chromosome X - NC_037357.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC104976321 Neighboring gene uncharacterized LOC132344353 Neighboring gene uncharacterized LOC132344270 Neighboring gene retrotransposon Gag like 8C Neighboring gene family with sequence similarity 127, member A

    Genomic regions, transcripts, and products

    Genomic Sequence:
    NC_037357.1 Chromosome X Reference ARS-UCD2.0 Primary Assembly

    Expression

    • Project title: Dominette sequence data
    • BioProject: PRJNA294306
    • Analysis date: Tue Dec 17 08:57:05 2024

    General protein information

    Preferred Names
    retrotransposon Gag-like protein 8C
    Names
    family with sequence similarity 127, member A-like

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001205276.2NP_001192205.1  retrotransposon Gag-like protein 8C

      See identical proteins and their annotated locations for NP_001192205.1

      Status: PROVISIONAL

      Source sequence(s)
      BC142004
      UniProtKB/Swiss-Prot
      Q1JQ94
      Related
      ENSBTAP00070045290.1, ENSBTAT00070074343.1
      Conserved Domains (1) summary
      pfam16297
      Location:2113
      DUF4939; Domain of unknown function (DUF4939)

    RefSeqs of Annotated Genomes: GCF_002263795.3-RS_2024_12

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ARS-UCD2.0 Primary Assembly

    Genomic

    1. NC_037357.1 Reference ARS-UCD2.0 Primary Assembly

      Range
      18782980..18784170
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)