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    GID8 GID complex subunit 8 homolog [ Bos taurus (domestic cattle) ]

    Gene ID: 505570, updated on 30-Jan-2025

    Summary

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    Official Symbol
    GID8provided by VGNC
    Official Full Name
    GID complex subunit 8 homologprovided by VGNC
    Primary source
    VGNC:VGNC:29353
    See related
    EnsemblRapid:ENSBTAG00070026702
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Bos taurus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
    Also known as
    C13H20orf11
    Orthologs
    human mouse all
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    Genomic context

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    See GID8 in Genome Data Viewer
    Location:
    chromosome: 13
    Exon count:
    6
    Annotation release Status Assembly Chr Location
    RS_2024_12 current ARS-UCD2.0 (GCF_002263795.3) 13 NC_037340.1 (54463032..54471045, complement)

    Chromosome 13 - NC_037340.1Genomic Context describing neighboring genes Neighboring gene basic helix-loop-helix family member e23 Neighboring gene solute carrier family 17 member 9 Neighboring gene death inducer-obliterator 1 Neighboring gene transcription factor like 5 Neighboring gene collagen type IX alpha 3 chain Neighboring gene opioid growth factor receptor

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_037340.1 Chromosome 13 Reference ARS-UCD2.0 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Expression

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    • Project title: Dominette sequence data
    • BioProject: PRJNA294306
    • Analysis date: Tue Dec 17 08:57:05 2024

    Bibliography

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    Related articles in PubMed

    1. The small GTPase RAB28 is required for phagocytosis of cone outer segments by the murine retinal pigmented epithelium. Ying G, et al. J Biol Chem, 2018 Nov 9. PMID 30228185, Free PMC Article
    2. A whole-genome assembly of the domestic cow, Bos taurus. Zimin AV, et al. Genome Biol, 2009. PMID 19393038, Free PMC Article
    3. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    4. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Markers

    Homology

    Clone Names

    • MGC134411

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in positive regulation of canonical Wnt signaling pathway IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in proteasome-mediated ubiquitin-dependent protein catabolic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    glucose-induced degradation protein 8 homolog
    Names
    protein C20orf11 homolog

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001037587.2 → NP_001032676.1  glucose-induced degradation protein 8 homolog

      See identical proteins and their annotated locations for NP_001032676.1

      Status: PROVISIONAL

      Source sequence(s)
      BC109762
      UniProtKB/Swiss-Prot
      Q32L52
      Related
      ENSBTAP00070035923.1, ENSBTAT00070060518.1
      Conserved Domains (2) summary
      pfam08513
      Location:28 → 52
      LisH
      pfam10607
      Location:63 → 207
      CLTH; CTLH/CRA C-terminal to LisH motif domain

    RefSeqs of Annotated Genomes: GCF_002263795.3-RS_2024_12

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ARS-UCD2.0 Primary Assembly

    Genomic

    1. NC_037340.1 Reference ARS-UCD2.0 Primary Assembly

      Range
      54463032..54471045 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_059892453.1 → XP_059748436.1  glucose-induced degradation protein 8 homolog isoform X1

      UniProtKB/Swiss-Prot
      Q32L52

    2. XM_005214556.4 → XP_005214613.1  glucose-induced degradation protein 8 homolog isoform X1

      See identical proteins and their annotated locations for XP_005214613.1

      UniProtKB/Swiss-Prot
      Q32L52
      Conserved Domains (2) summary
      pfam08513
      Location:28 → 52
      LisH
      pfam10607
      Location:63 → 207
      CLTH; CTLH/CRA C-terminal to LisH motif domain
    Nucleotide Protein Strain
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q32L52.1 GenPept UniProtKB/Swiss-Prot:Q32L52

    Gene LinkOut

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