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    ODF1 outer dense fiber of sperm tails 1 [ Bos taurus (domestic cattle) ]

    Gene ID: 281366, updated on 27-Dec-2024

    Summary

    Official Symbol
    ODF1provided by VGNC
    Official Full Name
    outer dense fiber of sperm tails 1provided by VGNC
    Primary source
    VGNC:VGNC:32400
    See related
    BGD:BT27185; Ensembl:ENSBTAG00000003445
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Bos taurus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
    Also known as
    ODF
    Orthologs
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    Genomic context

    See ODF1 in Genome Data Viewer
    Location:
    chromosome: 14
    Exon count:
    2
    Annotation release Status Assembly Chr Location
    RS_2024_12 current ARS-UCD2.0 (GCF_002263795.3) 14 NC_037341.1 (61844560..61854021, complement)

    Chromosome 14 - NC_037341.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC132342217 Neighboring gene KLF transcription factor 10 Neighboring gene uncharacterized LOC104974106 Neighboring gene ubiquitin protein ligase E3 component n-recognin 5 Neighboring gene U6 spliceosomal RNA Neighboring gene ribonucleotide reductase regulatory TP53 inducible subunit M2B

    Genomic regions, transcripts, and products

    Genomic Sequence:
    NC_037341.1 Chromosome 14 Reference ARS-UCD2.0 Primary Assembly

    Expression

    • Project title: Dominette sequence data
    • BioProject: PRJNA294306
    • Analysis date: Tue Dec 17 08:57:05 2024

    General protein information

    Preferred Names
    outer dense fiber protein 1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_174131.4NP_776556.3  outer dense fiber protein 1

      Status: VALIDATED

      Source sequence(s)
      BC102630, DT852369
      UniProtKB/TrEMBL
      F1MZM5, Q3SZZ8
      Related
      ENSBTAP00000004476.2, ENSBTAT00000004476.3
      Conserved Domains (1) summary
      cd06482
      Location:116202
      ACD_HspB10; Alpha crystallin domain (ACD) found in mammalian small heat shock protein (sHsp) HspB10, also known as sperm outer dense fiber protein (ODFP), and similar proteins. sHsps are molecular chaperones that suppress protein aggregation and protect against cell ...

    RefSeqs of Annotated Genomes: GCF_002263795.3-RS_2024_12

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ARS-UCD2.0 Primary Assembly

    Genomic

    1. NC_037341.1 Reference ARS-UCD2.0 Primary Assembly

      Range
      61844560..61854021 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)