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    RBM28 RNA binding motif protein 28 [ Bos taurus (domestic cattle) ]

    Gene ID: 507132, updated on 30-Jan-2025

    Summary

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    Official Symbol
    RBM28provided by VGNC
    Official Full Name
    RNA binding motif protein 28provided by VGNC
    Primary source
    VGNC:VGNC:33796
    See related
    BGD:BT29319; EnsemblRapid:ENSBTAG00070026225
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Bos taurus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
    Orthologs
    human mouse all
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    Genomic context

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    See RBM28 in Genome Data Viewer
    Location:
    chromosome: 4
    Exon count:
    19
    Annotation release Status Assembly Chr Location
    RS_2024_12 current ARS-UCD2.0 (GCF_002263795.3) 4 NC_037331.1 (92499389..92531667, complement)

    Chromosome 4 - NC_037331.1Genomic Context describing neighboring genes Neighboring gene microRNA mir-129-1 Neighboring gene leptin Neighboring gene proline rich transmembrane protein 4 Neighboring gene transmembrane protein 53-like Neighboring gene inosine monophosphate dehydrogenase 1

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_037331.1 Chromosome 4 Reference ARS-UCD2.0 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Expression

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    • Project title: Dominette sequence data
    • BioProject: PRJNA294306
    • Analysis date: Tue Dec 17 08:57:05 2024

    Bibliography

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    Related articles in PubMed

    1. A whole-genome assembly of the domestic cow, Bos taurus. Zimin AV, et al. Genome Biol, 2009. PMID 19393038, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables mRNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in nucleolus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    RNA-binding protein 28

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001191390.1 → NP_001178319.1  RNA-binding protein 28

      See identical proteins and their annotated locations for NP_001178319.1

      Status: PROVISIONAL

      Source sequence(s)
      NKLS02000004
      UniProtKB/TrEMBL
      G3MZL2
      Conserved Domains (4) summary
      COG0724
      Location:5 → 82
      RRM; RNA recognition motif (RRM) domain [Translation, ribosomal structure and biogenesis]
      cd12415
      Location:186 → 268
      RRM3_RBM28_like; RNA recognition motif 3 in RNA-binding protein 28 (RBM28) and similar proteins
      cd12416
      Location:338 → 432
      RRM4_RBM28_like; RNA recognition motif 4 in RNA-binding protein 28 (RBM28) and similar proteins
      cl17169
      Location:5 → 57
      RRM_SF; RNA recognition motif (RRM) superfamily

    RefSeqs of Annotated Genomes: GCF_002263795.3-RS_2024_12

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ARS-UCD2.0 Primary Assembly

    Genomic

    1. NC_037331.1 Reference ARS-UCD2.0 Primary Assembly

      Range
      92499389..92531667 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_005205680.5 → XP_005205737.1  RNA-binding protein 28 isoform X1

      See identical proteins and their annotated locations for XP_005205737.1

      UniProtKB/TrEMBL
      E1BLD4
      Related
      ENSBTAP00070035251.1, ENSBTAT00070059442.1
      Conserved Domains (5) summary
      cd12413
      Location:5 → 81
      RRM1_RBM28_like; RNA recognition motif 1 in RNA-binding protein 28 (RBM28) and similar proteins
      cd12414
      Location:115 → 190
      RRM2_RBM28_like; RNA recognition motif 2 in RNA-binding protein 28 (RBM28) and similar proteins
      cd12415
      Location:327 → 409
      RRM3_RBM28_like; RNA recognition motif 3 in RNA-binding protein 28 (RBM28) and similar proteins
      cd12416
      Location:479 → 573
      RRM4_RBM28_like; RNA recognition motif 4 in RNA-binding protein 28 (RBM28) and similar proteins
      TIGR01661
      Location:6 → 406
      ELAV_HUD_SF; ELAV/HuD family splicing factor
    Nucleotide Protein Strain
    Heading Accession and Version

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