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    SEPTIN10 septin 10 [ Bos taurus (domestic cattle) ]

    Gene ID: 514603, updated on 30-Jan-2025

    Summary

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    Official Symbol
    SEPTIN10provided by VGNC
    Official Full Name
    septin 10provided by VGNC
    Primary source
    VGNC:VGNC:34450
    See related
    BGD:BT20837; EnsemblRapid:ENSBTAG00070013757
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Bos taurus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
    Also known as
    SEPT10
    Orthologs
    human mouse all
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    Genomic context

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    See SEPTIN10 in Genome Data Viewer
    Location:
    chromosome: 11
    Exon count:
    15
    Annotation release Status Assembly Chr Location
    RS_2024_12 current ARS-UCD2.0 (GCF_002263795.3) 11 NC_037338.1 (44267379..44324289)

    Chromosome 11 - NC_037338.1Genomic Context describing neighboring genes Neighboring gene eva-1 homolog A, regulator of programmed cell death Neighboring gene uncharacterized LOC112448778 Neighboring gene uncharacterized LOC101904087 Neighboring gene sosondowah ankyrin repeat domain family member C Neighboring gene SH3 domain containing ring finger 3 Neighboring gene uncharacterized LOC101904133 Neighboring gene ectodysplasin A receptor

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_037338.1 Chromosome 11 Reference ARS-UCD2.0 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Expression

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    • Project title: Dominette sequence data
    • BioProject: PRJNA294306
    • Analysis date: Tue Dec 17 08:57:05 2024

    Bibliography

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    Related articles in PubMed

    1. A whole-genome assembly of the domestic cow, Bos taurus. Zimin AV, et al. Genome Biol, 2009. PMID 19393038, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Clone Names

    • MGC128534

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables GTP binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables GTPase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables molecular adaptor activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in cytoskeleton-dependent cytokinesis IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in protein localization IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cell division site IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in microtubule cytoskeleton IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    part_of septin complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in septin ring IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    septin-10

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001046176.2 → NP_001039641.1  septin-10

      See identical proteins and their annotated locations for NP_001039641.1

      Status: PROVISIONAL

      Source sequence(s)
      BC105431
      UniProtKB/Swiss-Prot
      Q2KJB1
      UniProtKB/TrEMBL
      A0AAA9TP23
      Related
      ENSBTAP00070018563.1, ENSBTAT00070031324.1
      Conserved Domains (2) summary
      cd01850
      Location:62 → 330
      CDC_Septin; CDC/Septin GTPase family
      COG5019
      Location:43 → 396
      CDC3; Septin family protein [Cell cycle control, cell division, chromosome partitioning, Cytoskeleton]

    RefSeqs of Annotated Genomes: GCF_002263795.3-RS_2024_12

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ARS-UCD2.0 Primary Assembly

    Genomic

    1. NC_037338.1 Reference ARS-UCD2.0 Primary Assembly

      Range
      44267379..44324289
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_024998571.2 → XP_024854339.1  septin-10 isoform X2

      UniProtKB/TrEMBL
      A0AAA9SCC4, F1MDV8
      Related
      ENSBTAP00070018536.1, ENSBTAT00070031244.1
      Conserved Domains (1) summary
      cd01850
      Location:62 → 330
      CDC_Septin; CDC/Septin GTPase family

    2. XM_024998572.2 → XP_024854340.1  septin-10 isoform X4

      UniProtKB/TrEMBL
      A0AAA9SVY7, F1MDV8
      Related
      ENSBTAP00070018504.1, ENSBTAT00070031104.1
      Conserved Domains (1) summary
      cd01850
      Location:62 → 330
      CDC_Septin; CDC/Septin GTPase family

    3. XM_059891205.1 → XP_059747188.1  septin-10 isoform X1

      UniProtKB/TrEMBL
      F1MDV8

    4. XM_059891209.1 → XP_059747192.1  septin-10 isoform X6

      UniProtKB/TrEMBL
      A0AAA9TUG2, F1MDV8
      Related
      ENSBTAP00070018524.1, ENSBTAT00070031190.1

    5. XM_059891207.1 → XP_059747190.1  septin-10 isoform X3

      UniProtKB/TrEMBL
      F1MDV8

    6. XM_059891208.1 → XP_059747191.1  septin-10 isoform X5

      UniProtKB/TrEMBL
      A0AAA9TP23

    7. XM_059891211.1 → XP_059747194.1  septin-10 isoform X8

      UniProtKB/TrEMBL
      A0AAA9TP23
      Related
      ENSBTAP00070018517.1, ENSBTAT00070031161.1

    8. XM_059891210.1 → XP_059747193.1  septin-10 isoform X7

      UniProtKB/TrEMBL
      A0AAA9TP23

    9. XM_024998573.2 → XP_024854341.1  septin-10 isoform X7

      UniProtKB/TrEMBL
      A0AAA9TP23
      Conserved Domains (1) summary
      cd01850
      Location:21 → 289
      CDC_Septin; CDC/Septin GTPase family

    10. XM_059891206.1 → XP_059747189.1  septin-10 isoform X1

      UniProtKB/TrEMBL
      F1MDV8
    Nucleotide Protein Strain
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q2KJB1.1 GenPept UniProtKB/Swiss-Prot:Q2KJB1

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

    Molecular Biology Databases
    Research Materials