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    LOC100196901 uncharacterized LOC100196901 [ Bos taurus (domestic cattle) ]

    Gene ID: 100196901, updated on 27-Dec-2024

    Summary

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    Gene symbol
    LOC100196901
    Gene description
    uncharacterized LOC100196901
    Gene type
    ncRNA
    RefSeq status
    VALIDATED
    Organism
    Bos taurus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
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    Genomic context

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    See LOC100196901 in Genome Data Viewer
    Location:
    chromosome: 19
    Exon count:
    6
    Annotation release Status Assembly Chr Location
    RS_2024_12 current ARS-UCD2.0 (GCF_002263795.3) 19 NC_037346.1 (55194340..55198834, complement)

    Chromosome 19 - NC_037346.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC132343119 Neighboring gene ST6 N-acetylgalactosaminide alpha-2,6-sialyltransferase 2 Neighboring gene uncharacterized LOC132343118 Neighboring gene small nucleolar RNA R38 Neighboring gene small nucleolar RNA R38 Neighboring gene uncharacterized LOC100848027 Neighboring gene cytoglobin

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_037346.1 Chromosome 19 Reference ARS-UCD2.0 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Expression

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    • Project title: Dominette sequence data
    • BioProject: PRJNA294306
    • Analysis date: Tue Dec 17 08:57:05 2024

    Bibliography

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    Related articles in PubMed

    1. Discovery and characterization of 91 novel transcripts expressed in cattle placenta. Kumar CG, et al. BMC Genomics, 2007 May 9. PMID 17488528, Free PMC Article
    2. Discovery of eight novel divergent homologs expressed in cattle placenta. Larson JH, et al. Physiol Genomics, 2006 May 16. PMID 16554549

    GeneRIFs: Gene References Into Functions

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    RNA

    1. NR_038105.2 RNA Sequence

      Status: VALIDATED

      Description
      Transcript Variant: This variant (1) represents the longest transcript.
      Source sequence(s)
      NKLS02000019

    2. NR_038106.2 RNA Sequence

      Status: VALIDATED

      Description
      Transcript Variant: This variant (2) contains a different segment for its 3' end, compared to variant 1.
      Source sequence(s)
      NKLS02000019

    3. NR_038107.2 RNA Sequence

      Status: VALIDATED

      Description
      Transcript Variant: This variant (3) uses a different splice site in the 3' end, compared to variant 1.
      Source sequence(s)
      NKLS02000019

    RefSeqs of Annotated Genomes: GCF_002263795.3-RS_2024_12

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ARS-UCD2.0 Primary Assembly

    Genomic

    1. NC_037346.1 Reference ARS-UCD2.0 Primary Assembly

      Range
      55194340..55198834 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

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    Research Materials