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    ZNF274 zinc finger protein 274 [ Bos taurus (domestic cattle) ]

    Gene ID: 534170, updated on 1-Jan-2025

    Summary

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    Official Symbol
    ZNF274provided by VGNC
    Official Full Name
    zinc finger protein 274provided by VGNC
    Primary source
    VGNC:VGNC:37235
    See related
    BGD:BT16246; Ensembl:ENSBTAG00000013353
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Bos taurus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
    Orthologs
    human mouse all
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    Genomic context

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    See ZNF274 in Genome Data Viewer
    Location:
    chromosome: 18
    Exon count:
    10
    Annotation release Status Assembly Chr Location
    RS_2024_12 current ARS-UCD2.0 (GCF_002263795.3) 18 NC_037345.1 (65545936..65569233)

    Chromosome 18 - NC_037345.1Genomic Context describing neighboring genes Neighboring gene zinc finger protein 135 Neighboring gene zinc finger protein 329 Neighboring gene U6 spliceosomal RNA Neighboring gene uncharacterized LOC101902458 Neighboring gene uncharacterized LOC100847745

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_037345.1 Chromosome 18 Reference ARS-UCD2.0 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Expression

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    • Project title: Dominette sequence data
    • BioProject: PRJNA294306
    • Analysis date: Tue Dec 17 08:57:05 2024

    Bibliography

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    Related articles in PubMed

    1. Sequence evaluation of four pooled-tissue normalized bovine cDNA libraries and construction of a gene index for cattle. Smith TP, et al. Genome Res, 2001 Apr. PMID 11282978, Free PMC Article
    2. Characterization of 954 bovine full-CDS cDNA sequences. Harhay GP, et al. BMC Genomics, 2005 Nov 23. PMID 16305752, Free PMC Article
    3. A whole-genome assembly of the domestic cow, Bos taurus. Zimin AV, et al. Genome Biol, 2009. PMID 19393038, Free PMC Article
    4. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Process Evidence Code Pubs
    involved_in regulation of DNA-templated transcription IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    neurotrophin receptor-interacting factor homolog

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001101153.1 → NP_001094623.1  neurotrophin receptor-interacting factor homolog

      See identical proteins and their annotated locations for NP_001094623.1

      Status: PROVISIONAL

      Source sequence(s)
      BC149474
      UniProtKB/Swiss-Prot
      A6QPT6, Q0V8D6
      Related
      ENSBTAP00000012662.5, ENSBTAT00000012662.6
      Conserved Domains (7) summary
      smart00349
      Location:14 → 74
      KRAB; krueppel associated box
      COG5048
      Location:475 → 613
      COG5048; FOG: Zn-finger [General function prediction only]
      sd00017
      Location:536 → 556
      ZF_C2H2; C2H2 Zn finger [structural motif]
      pfam00096
      Location:562 → 584
      zf-C2H2; Zinc finger, C2H2 type
      pfam01352
      Location:14 → 53
      KRAB; KRAB box
      pfam02023
      Location:157 → 245
      SCAN; SCAN domain
      pfam13465
      Location:576 → 601
      zf-H2C2_2; Zinc-finger double domain

    RefSeqs of Annotated Genomes: GCF_002263795.3-RS_2024_12

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ARS-UCD2.0 Primary Assembly

    Genomic

    1. NC_037345.1 Reference ARS-UCD2.0 Primary Assembly

      Range
      65545936..65569233
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_059876824.1 → XP_059732807.1  neurotrophin receptor-interacting factor homolog isoform X2

    2. XM_059876827.1 → XP_059732810.1  neurotrophin receptor-interacting factor homolog isoform X3

    3. XM_010815573.4 → XP_010813875.1  neurotrophin receptor-interacting factor homolog isoform X1

      See identical proteins and their annotated locations for XP_010813875.1

      UniProtKB/Swiss-Prot
      A6QPT6, Q0V8D6
      Conserved Domains (7) summary
      smart00349
      Location:14 → 74
      KRAB; krueppel associated box
      COG5048
      Location:475 → 613
      COG5048; FOG: Zn-finger [General function prediction only]
      sd00017
      Location:536 → 556
      ZF_C2H2; C2H2 Zn finger [structural motif]
      pfam00096
      Location:562 → 584
      zf-C2H2; Zinc finger, C2H2 type
      pfam01352
      Location:14 → 53
      KRAB; KRAB box
      pfam02023
      Location:157 → 245
      SCAN; SCAN domain
      pfam13465
      Location:576 → 601
      zf-H2C2_2; Zinc-finger double domain

    4. XM_059876825.1 → XP_059732808.1  neurotrophin receptor-interacting factor homolog isoform X2

    5. XM_059876826.1 → XP_059732809.1  neurotrophin receptor-interacting factor homolog isoform X2

      Related
      ENSBTAP00000062648.1, ENSBTAT00000072356.2

    6. XM_024978379.2 → XP_024834147.1  neurotrophin receptor-interacting factor homolog isoform X3

      Conserved Domains (4) summary
      COG5048
      Location:370 → 508
      COG5048; FOG: Zn-finger [General function prediction only]
      sd00017
      Location:431 → 451
      ZF_C2H2; C2H2 Zn finger [structural motif]
      pfam01352
      Location:172 → 213
      KRAB; KRAB box
      pfam02023
      Location:52 → 140
      SCAN; SCAN domain
    Nucleotide Protein Strain
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    A6QPT6.1 GenPept UniProtKB/Swiss-Prot:A6QPT6

    Gene LinkOut

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