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    RAD52 RAD52 homolog, DNA repair protein [ Bos taurus (domestic cattle) ]

    Gene ID: 512897, updated on 30-Jan-2025

    Summary

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    Official Symbol
    RAD52provided by VGNC
    Official Full Name
    RAD52 homolog, DNA repair proteinprovided by VGNC
    Primary source
    VGNC:VGNC:33688
    See related
    BGD:BT14205; EnsemblRapid:ENSBTAG00070028671
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Bos taurus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
    Orthologs
    human mouse all
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    Genomic context

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    See RAD52 in Genome Data Viewer
    Location:
    chromosome: 5
    Exon count:
    14
    Annotation release Status Assembly Chr Location
    RS_2024_12 current ARS-UCD2.0 (GCF_002263795.3) 5 NC_037332.1 (107708711..107734431, complement)

    Chromosome 5 - NC_037332.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC112446768 Neighboring gene microRNA mir-2437 Neighboring gene WNK lysine deficient protein kinase 1 Neighboring gene uncharacterized LOC112446769 Neighboring gene ELKS/RAB6-interacting/CAST family member 1 Neighboring gene Wnt family member 5B Neighboring gene F-box and leucine rich repeat protein 14

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_037332.1 Chromosome 5 Reference ARS-UCD2.0 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Expression

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    • Project title: Dominette sequence data
    • BioProject: PRJNA294306
    • Analysis date: Tue Dec 17 08:57:05 2024

    Bibliography

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    Related articles in PubMed

    1. Sequence evaluation of four pooled-tissue normalized bovine cDNA libraries and construction of a gene index for cattle. Smith TP, et al. Genome Res, 2001 Apr. PMID 11282978, Free PMC Article
    2. Characterization of 954 bovine full-CDS cDNA sequences. Harhay GP, et al. BMC Genomics, 2005 Nov 23. PMID 16305752, Free PMC Article
    3. A whole-genome assembly of the domestic cow, Bos taurus. Zimin AV, et al. Genome Biol, 2009. PMID 19393038, Free PMC Article
    4. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    5. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    Pathways from PubChem

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    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Process Evidence Code Pubs
    involved_in DNA recombinase assembly IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in double-strand break repair via homologous recombination IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in double-strand break repair via single-strand annealing IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in mitotic recombination IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    DNA repair protein RAD52 homolog

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001024525.1 → NP_001019696.1  DNA repair protein RAD52 homolog

      See identical proteins and their annotated locations for NP_001019696.1

      Status: PROVISIONAL

      Source sequence(s)
      BT021822
      UniProtKB/TrEMBL
      A0AAA9S6C3, Q58CX5
      Related
      ENSBTAP00070039309.1, ENSBTAT00070065191.1
      Conserved Domains (1) summary
      TIGR00607
      Location:37 → 198
      rad52; recombination protein rad52

    RefSeqs of Annotated Genomes: GCF_002263795.3-RS_2024_12

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ARS-UCD2.0 Primary Assembly

    Genomic

    1. NC_037332.1 Reference ARS-UCD2.0 Primary Assembly

      Range
      107708711..107734431 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_005207239.5 → XP_005207296.1  DNA repair protein RAD52 homolog isoform X4

      UniProtKB/TrEMBL
      A0AAA9S6C3
      Conserved Domains (1) summary
      cl01936
      Location:37 → 115
      Rad52_Rad22; Rad52/22 family double-strand break repair protein

    2. XM_005207234.5 → XP_005207291.1  DNA repair protein RAD52 homolog isoform X2

      See identical proteins and their annotated locations for XP_005207291.1

      UniProtKB/TrEMBL
      A0AAA9S6C3, A2VE43
      Conserved Domains (1) summary
      TIGR00607
      Location:37 → 198
      rad52; recombination protein rad52

    3. XM_010805644.4 → XP_010803946.1  DNA repair protein RAD52 homolog isoform X3

      UniProtKB/TrEMBL
      A0AAA9S6C3
      Conserved Domains (1) summary
      cl01936
      Location:37 → 131
      Rad52_Rad22; Rad52/22 family double-strand break repair protein

    4. XM_010805640.4 → XP_010803942.1  DNA repair protein RAD52 homolog isoform X1

      See identical proteins and their annotated locations for XP_010803942.1

      UniProtKB/TrEMBL
      A0AAA9S6C3, F6QFR0
      Related
      ENSBTAP00070039337.1, ENSBTAT00070065222.1
      Conserved Domains (1) summary
      cl01936
      Location:37 → 214
      Rad52_Rad22; Rad52/22 family double-strand break repair protein

    5. XM_010805643.4 → XP_010803945.1  DNA repair protein RAD52 homolog isoform X2

      See identical proteins and their annotated locations for XP_010803945.1

      UniProtKB/TrEMBL
      A0AAA9S6C3, A2VE43
      Conserved Domains (1) summary
      TIGR00607
      Location:37 → 198
      rad52; recombination protein rad52

    6. XM_010805641.4 → XP_010803943.1  DNA repair protein RAD52 homolog isoform X1

      See identical proteins and their annotated locations for XP_010803943.1

      UniProtKB/TrEMBL
      A0AAA9S6C3, F6QFR0
      Conserved Domains (1) summary
      cl01936
      Location:37 → 214
      Rad52_Rad22; Rad52/22 family double-strand break repair protein

    7. XM_059886321.1 → XP_059742304.1  DNA repair protein RAD52 homolog isoform X1

      UniProtKB/TrEMBL
      A0AAA9S6C3, F6QFR0

    8. XM_005207236.5 → XP_005207293.1  DNA repair protein RAD52 homolog isoform X2

      See identical proteins and their annotated locations for XP_005207293.1

      UniProtKB/TrEMBL
      A0AAA9S6C3, A2VE43
      Conserved Domains (1) summary
      TIGR00607
      Location:37 → 198
      rad52; recombination protein rad52

    9. XM_010805642.4 → XP_010803944.1  DNA repair protein RAD52 homolog isoform X1

      See identical proteins and their annotated locations for XP_010803944.1

      UniProtKB/TrEMBL
      A0AAA9S6C3, F6QFR0
      Conserved Domains (1) summary
      cl01936
      Location:37 → 214
      Rad52_Rad22; Rad52/22 family double-strand break repair protein
    Nucleotide Protein Strain
    Heading Accession and Version

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