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    TESPA1 thymocyte expressed, positive selection associated 1 [ Bos taurus (domestic cattle) ]

    Gene ID: 538993, updated on 27-Dec-2024

    Summary

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    Official Symbol
    TESPA1provided by VGNC
    Official Full Name
    thymocyte expressed, positive selection associated 1provided by VGNC
    Primary source
    VGNC:VGNC:35756
    See related
    BGD:BT22485; Ensembl:ENSBTAG00000005120
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Bos taurus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
    Orthologs
    human mouse all
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    Genomic context

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    See TESPA1 in Genome Data Viewer
    Location:
    chromosome: 5
    Exon count:
    12
    Annotation release Status Assembly Chr Location
    RS_2024_12 current ARS-UCD2.0 (GCF_002263795.3) 5 NC_037332.1 (59925008..59961264)

    Chromosome 5 - NC_037332.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC132342120 Neighboring gene neuronal differentiation 4 Neighboring gene uncharacterized LOC112446712 Neighboring gene U6 spliceosomal RNA Neighboring gene netrin 4 Neighboring gene small nuclear ribonucleoprotein polypeptide F Neighboring gene coiled-coil domain containing 38

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_037332.1 Chromosome 5 Reference ARS-UCD2.0 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Expression

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    • Project title: Dominette sequence data
    • BioProject: PRJNA294306
    • Analysis date: Tue Dec 17 08:57:05 2024

    Bibliography

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    Related articles in PubMed

    1. A whole-genome assembly of the domestic cow, Bos taurus. Zimin AV, et al. Genome Biol, 2009. PMID 19393038, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Clone Names

    • KIAA0748

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables signaling receptor binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    protein TESPA1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_002263795.3-RS_2024_12

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ARS-UCD2.0 Primary Assembly

    Genomic

    1. NC_037332.1 Reference ARS-UCD2.0 Primary Assembly

      Range
      59925008..59961264
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_059886959.1 → XP_059742942.1  protein TESPA1 isoform X1

      UniProtKB/TrEMBL
      D5KB44

    2. XM_010805255.4 → XP_010803557.2  protein TESPA1 isoform X2

      UniProtKB/TrEMBL
      D5KB44

    3. XM_010805254.4 → XP_010803556.1  protein TESPA1 isoform X4

      See identical proteins and their annotated locations for XP_010803556.1

      UniProtKB/TrEMBL
      D5KB44
      Conserved Domains (1) summary
      pfam14722
      Location:133 → 290
      KRAP_IP3R_bind; Ki-ras-induced actin-interacting protein-IP3R-interacting domain

    4. XM_002687624.6 → XP_002687670.3  protein TESPA1 isoform X3

      UniProtKB/TrEMBL
      D5KB44, F1MNV6
      Related
      ENSBTAP00000006753.7, ENSBTAT00000006753.7

    5. XM_010805256.4 → XP_010803558.2  protein TESPA1 isoform X5

      UniProtKB/TrEMBL
      D5KB44
      Related
      ENSBTAP00000082785.1, ENSBTAT00000100081.1

    6. XM_059886960.1 → XP_059742943.1  protein TESPA1 isoform X6

      UniProtKB/TrEMBL
      A0AAA9TTB8
    Nucleotide Protein Strain
    Heading Accession and Version

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