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    NEDD1 NEDD1 gamma-tubulin ring complex targeting factor [ Bos taurus (domestic cattle) ]

    Gene ID: 519463, updated on 30-Jan-2025

    Summary

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    Official Symbol
    NEDD1provided by VGNC
    Official Full Name
    NEDD1 gamma-tubulin ring complex targeting factorprovided by VGNC
    Primary source
    VGNC:VGNC:31982
    See related
    BGD:BT20643; EnsemblRapid:ENSBTAG00070015100
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Bos taurus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
    Orthologs
    human mouse all
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    Genomic context

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    See NEDD1 in Genome Data Viewer
    Location:
    chromosome: 5
    Exon count:
    15
    Annotation release Status Assembly Chr Location
    RS_2024_12 current ARS-UCD2.0 (GCF_002263795.3) 5 NC_037332.1 (61105177..61157194)

    Chromosome 5 - NC_037332.1Genomic Context describing neighboring genes Neighboring gene ETS transcription factor ELK3 Neighboring gene cyclin dependent kinase 17 Neighboring gene cilia and flagella associated protein 54 Neighboring gene transfer RNA cysteine (anticodon GCA) Neighboring gene transfer RNA glycine (anticodon UCC) Neighboring gene uncharacterized LOC132345304 Neighboring gene microRNA mir-1251

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_037332.1 Chromosome 5 Reference ARS-UCD2.0 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Expression

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    • Project title: Dominette sequence data
    • BioProject: PRJNA294306
    • Analysis date: Tue Dec 17 08:57:05 2024

    Bibliography

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    Related articles in PubMed

    1. A whole-genome assembly of the domestic cow, Bos taurus. Zimin AV, et al. Genome Biol, 2009. PMID 19393038, Free PMC Article
    2. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, et al. Proc Natl Acad Sci U S A, 2002 Dec 24. PMID 12477932, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    Pathways from PubChem

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    General gene information

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    Homology

    Clone Names

    • MGC128761

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables gamma-tubulin binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in microtubule nucleation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in mitotic cell cycle IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in centriole IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in ciliary basal body IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in pericentriolar material IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in spindle pole IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    protein NEDD1
    Names
    NEDD-1
    neural precursor cell expressed developmentally down-regulated protein 1
    neural precursor cell expressed, developmentally down-regulated 1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001035333.2 → NP_001030410.1  protein NEDD1

      See identical proteins and their annotated locations for NP_001030410.1

      Status: PROVISIONAL

      Source sequence(s)
      BC107541
      UniProtKB/Swiss-Prot
      Q3B7M6
      Related
      ENSBTAP00070020221.1, ENSBTAT00070034138.1
      Conserved Domains (2) summary
      cd00200
      Location:24 → 299
      WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
      sd00039
      Location:81 → 117
      7WD40; WD40 repeat [structural motif]

    RefSeqs of Annotated Genomes: GCF_002263795.3-RS_2024_12

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ARS-UCD2.0 Primary Assembly

    Genomic

    1. NC_037332.1 Reference ARS-UCD2.0 Primary Assembly

      Range
      61105177..61157194
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_024991762.2 → XP_024847530.1  protein NEDD1 isoform X1

      UniProtKB/Swiss-Prot
      Q3B7M6
      Conserved Domains (2) summary
      cd00200
      Location:24 → 299
      WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
      sd00039
      Location:81 → 117
      7WD40; WD40 repeat [structural motif]
    Nucleotide Protein Strain
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q3B7M6.1 GenPept UniProtKB/Swiss-Prot:Q3B7M6

    Gene LinkOut

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