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    FEM1C fem-1 homolog C [ Bos taurus (domestic cattle) ]

    Gene ID: 541180, updated on 27-Dec-2024

    Summary

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    Official Symbol
    FEM1Cprovided by VGNC
    Official Full Name
    fem-1 homolog Cprovided by VGNC
    Primary source
    VGNC:VGNC:28946
    See related
    BGD:BT29817; Ensembl:ENSBTAG00000008699
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Bos taurus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
    Orthologs
    human mouse all
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    Genomic context

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    See FEM1C in Genome Data Viewer
    Location:
    chromosome: 10
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    RS_2024_12 current ARS-UCD2.0 (GCF_002263795.3) 10 NC_037337.1 (4358417..4388025, complement)

    Chromosome 10 - NC_037337.1Genomic Context describing neighboring genes Neighboring gene small ribosomal subunit protein eS27-like Neighboring gene coiled-coil domain containing 112 Neighboring gene GTP:AMP phosphotransferase AK3, mitochondrial-like Neighboring gene sorting nexin-12-like Neighboring gene exocyst complex component 6B-like Neighboring gene uncharacterized LOC107132816 Neighboring gene TIR domain containing adaptor molecule 2

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_037337.1 Chromosome 10 Reference ARS-UCD2.0 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Expression

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    • Project title: Dominette sequence data
    • BioProject: PRJNA294306
    • Analysis date: Tue Dec 17 08:57:05 2024

    Bibliography

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    Related articles in PubMed

    1. A whole-genome assembly of the domestic cow, Bos taurus. Zimin AV, et al. Genome Biol, 2009. PMID 19393038, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    protein fem-1 homolog C
    Names
    FEM1-gamma
    protein fem-1 homolog C-like

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001101219.1 → NP_001094689.1  protein fem-1 homolog C

      See identical proteins and their annotated locations for NP_001094689.1

      Status: PROVISIONAL

      Source sequence(s)
      BC151399
      UniProtKB/Swiss-Prot
      A7MB89
      UniProtKB/TrEMBL
      A0AAA9T0B6
      Related
      ENSBTAP00000011464.3, ENSBTAT00000011464.4
      Conserved Domains (4) summary
      PHA02876
      Location:164 → 568
      PHA02876; ankyrin repeat protein; Provisional
      COG0666
      Location:462 → 599
      ANKYR; Ankyrin repeat [Signal transduction mechanisms]
      sd00045
      Location:118 → 146
      ANK; ANK repeat [structural motif]
      pfam12796
      Location:87 → 178
      Ank_2; Ankyrin repeats (3 copies)

    RefSeqs of Annotated Genomes: GCF_002263795.3-RS_2024_12

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ARS-UCD2.0 Primary Assembly

    Genomic

    1. NC_037337.1 Reference ARS-UCD2.0 Primary Assembly

      Range
      4358417..4388025 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_059890608.1 → XP_059746591.1  protein fem-1 homolog C isoform X1

      UniProtKB/Swiss-Prot
      A7MB89
      UniProtKB/TrEMBL
      A0AAA9T0B6

    2. XM_059890610.1 → XP_059746593.1  protein fem-1 homolog C isoform X1

      UniProtKB/Swiss-Prot
      A7MB89
      UniProtKB/TrEMBL
      A0AAA9T0B6

    3. XM_059890609.1 → XP_059746592.1  protein fem-1 homolog C isoform X1

      UniProtKB/Swiss-Prot
      A7MB89
      UniProtKB/TrEMBL
      A0AAA9T0B6
    Nucleotide Protein Strain
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    A7MB89.1 GenPept UniProtKB/Swiss-Prot:A7MB89

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